Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.86■□□□□ 0.77
Hoxb2P0C1T1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.85■□□□□ 0.77
Hoxb2P0C1T1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxb2P0C1T1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxb2P0C1T1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxb2P0C1T1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxb2P0C1T1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxb2P0C1T1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxb2P0C1T1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxb2P0C1T1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Hoxb2P0C1T1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxb2P0C1T1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxb2P0C1T1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxb2P0C1T1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxb2P0C1T1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxb2P0C1T1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxb2P0C1T1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxb2P0C1T1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxb2P0C1T1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.82■□□□□ 0.76
Hoxb2P0C1T1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxb2P0C1T1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxb2P0C1T1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxb2P0C1T1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxb2P0C1T1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxb2P0C1T1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxb2P0C1T1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxb2P0C1T1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.8■□□□□ 0.76
Hoxb2P0C1T1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxb2P0C1T1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb2P0C1T1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.79■□□□□ 0.76
Hoxb2P0C1T1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb2P0C1T1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb2P0C1T1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hoxb2P0C1T1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxb2P0C1T1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxb2P0C1T1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxb2P0C1T1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxb2P0C1T1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb2P0C1T1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb2P0C1T1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb2P0C1T1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.77■□□□□ 0.76
Hoxb2P0C1T1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb2P0C1T1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb2P0C1T1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Hoxb2P0C1T1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb2P0C1T1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb2P0C1T1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Hoxb2P0C1T1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hoxb2P0C1T1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hoxb2P0C1T1 Gm14523-201ENSMUST00000117260 558 ntBASIC19.76■□□□□ 0.75
Hoxb2P0C1T1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Hoxb2P0C1T1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb2P0C1T1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb2P0C1T1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb2P0C1T1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Hoxb2P0C1T1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb2P0C1T1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb2P0C1T1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.74■□□□□ 0.75
Hoxb2P0C1T1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb2P0C1T1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb2P0C1T1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb2P0C1T1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.73■□□□□ 0.75
Hoxb2P0C1T1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb2P0C1T1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Hoxb2P0C1T1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb2P0C1T1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hoxb2P0C1T1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb2P0C1T1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb2P0C1T1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Hoxb2P0C1T1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb2P0C1T1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxb2P0C1T1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Hoxb2P0C1T1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb2P0C1T1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb2P0C1T1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb2P0C1T1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.71■□□□□ 0.75
Hoxb2P0C1T1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb2P0C1T1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb2P0C1T1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.7■□□□□ 0.74
Hoxb2P0C1T1 Gm7332-201ENSMUST00000118351 454 ntBASIC19.7■□□□□ 0.74
Hoxb2P0C1T1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb2P0C1T1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.7■□□□□ 0.74
Hoxb2P0C1T1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb2P0C1T1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Hoxb2P0C1T1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb2P0C1T1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb2P0C1T1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hoxb2P0C1T1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb2P0C1T1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb2P0C1T1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb2P0C1T1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb2P0C1T1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.67■□□□□ 0.74
Hoxb2P0C1T1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Hoxb2P0C1T1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.67■□□□□ 0.74
Hoxb2P0C1T1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb2P0C1T1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb2P0C1T1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.66■□□□□ 0.74
Hoxb2P0C1T1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.66■□□□□ 0.74
Hoxb2P0C1T1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb2P0C1T1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms