Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sod1P08228 Gm44428-201ENSMUST00000204474 874 ntBASIC21.97■■□□□ 1.11
Sod1P08228 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Sod1P08228 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Sod1P08228 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sod1P08228 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sod1P08228 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Sod1P08228 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.96■■□□□ 1.11
Sod1P08228 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.95■■□□□ 1.1
Sod1P08228 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.95■■□□□ 1.1
Sod1P08228 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.95■■□□□ 1.1
Sod1P08228 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Sod1P08228 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sod1P08228 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sod1P08228 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sod1P08228 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sod1P08228 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sod1P08228 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sod1P08228 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sod1P08228 Gm5812-201ENSMUST00000061073 957 ntBASIC21.92■■□□□ 1.1
Sod1P08228 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sod1P08228 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sod1P08228 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Sod1P08228 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sod1P08228 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sod1P08228 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sod1P08228 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sod1P08228 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sod1P08228 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sod1P08228 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.89■■□□□ 1.09
Sod1P08228 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Sod1P08228 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Sod1P08228 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.88■■□□□ 1.09
Sod1P08228 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.87■■□□□ 1.09
Sod1P08228 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sod1P08228 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sod1P08228 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sod1P08228 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sod1P08228 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Sod1P08228 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sod1P08228 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Sod1P08228 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
Sod1P08228 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sod1P08228 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Sod1P08228 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.82■■□□□ 1.08
Sod1P08228 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sod1P08228 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sod1P08228 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sod1P08228 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.81■■□□□ 1.08
Sod1P08228 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sod1P08228 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Sod1P08228 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sod1P08228 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sod1P08228 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sod1P08228 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Sod1P08228 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sod1P08228 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Sod1P08228 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Sod1P08228 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.78■■□□□ 1.08
Sod1P08228 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sod1P08228 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sod1P08228 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sod1P08228 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sod1P08228 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Sod1P08228 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.76■■□□□ 1.07
Sod1P08228 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sod1P08228 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sod1P08228 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.75■■□□□ 1.07
Sod1P08228 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sod1P08228 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.75■■□□□ 1.07
Sod1P08228 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.75■■□□□ 1.07
Sod1P08228 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sod1P08228 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sod1P08228 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sod1P08228 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sod1P08228 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Sod1P08228 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Sod1P08228 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.73■■□□□ 1.07
Sod1P08228 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sod1P08228 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Sod1P08228 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sod1P08228 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sod1P08228 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sod1P08228 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Sod1P08228 Gm15546-201ENSMUST00000122095 826 ntBASIC21.71■■□□□ 1.07
Sod1P08228 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.71■■□□□ 1.07
Sod1P08228 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sod1P08228 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sod1P08228 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sod1P08228 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sod1P08228 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Sod1P08228 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.7■■□□□ 1.06
Sod1P08228 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Sod1P08228 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sod1P08228 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.69■■□□□ 1.06
Sod1P08228 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sod1P08228 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sod1P08228 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.68■■□□□ 1.06
Sod1P08228 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.68■■□□□ 1.06
Sod1P08228 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 2875.8 ms