Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04940 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04940 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04940 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04940 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04940 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04940 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
P04940 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
P04940 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04940 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04940 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04940 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.54■□□□□ 0.56
P04940 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
P04940 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04940 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04940 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P04940 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04940 Gm9812-201ENSMUST00000061934 968 ntBASIC18.53■□□□□ 0.56
P04940 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
P04940 Mir3960-201ENSMUST00000198213 73 ntBASIC18.52■□□□□ 0.56
P04940 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
P04940 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
P04940 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.52■□□□□ 0.56
P04940 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
P04940 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04940 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
P04940 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04940 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P04940 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
P04940 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.51■□□□□ 0.55
P04940 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P04940 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
P04940 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.5■□□□□ 0.55
P04940 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
P04940 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
P04940 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.49■□□□□ 0.55
P04940 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04940 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
P04940 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
P04940 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.49■□□□□ 0.55
P04940 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
P04940 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P04940 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04940 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P04940 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
P04940 Gm45364-201ENSMUST00000210883 159 ntBASIC18.47■□□□□ 0.55
P04940 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P04940 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.47■□□□□ 0.55
P04940 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04940 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04940 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04940 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04940 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04940 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04940 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
P04940 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.46■□□□□ 0.55
P04940 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.46■□□□□ 0.55
P04940 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04940 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.45■□□□□ 0.54
P04940 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P04940 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.43■□□□□ 0.54
P04940 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04940 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04940 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.43■□□□□ 0.54
P04940 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.43■□□□□ 0.54
P04940 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P04940 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.42■□□□□ 0.54
P04940 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04940 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.42■□□□□ 0.54
P04940 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04940 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P04940 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04940 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04940 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04940 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04940 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P04940 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04940 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P04940 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P04940 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04940 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04940 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P04940 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04940 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04940 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04940 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P04940 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P04940 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04940 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04940 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.36■□□□□ 0.53
P04940 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04940 Terc-201ENSMUST00000082862 423 ntBASIC18.36■□□□□ 0.53
P04940 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04940 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
P04940 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.35■□□□□ 0.53
P04940 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.35■□□□□ 0.53
P04940 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04940 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04940 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.34■□□□□ 0.53
P04940 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms