Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
P04224 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
P04224 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
P04224 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
P04224 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
P04224 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
P04224 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.76■□□□□ 0.75
P04224 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
P04224 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
P04224 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
P04224 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
P04224 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
P04224 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
P04224 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
P04224 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
P04224 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
P04224 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
P04224 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.74■□□□□ 0.75
P04224 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.74■□□□□ 0.75
P04224 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
P04224 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.74■□□□□ 0.75
P04224 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P04224 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P04224 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
P04224 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
P04224 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
P04224 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
P04224 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
P04224 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.73■□□□□ 0.75
P04224 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
P04224 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
P04224 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P04224 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
P04224 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
P04224 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04224 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04224 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04224 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
P04224 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
P04224 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.71■□□□□ 0.75
P04224 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04224 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04224 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
P04224 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
P04224 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
P04224 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
P04224 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
P04224 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04224 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.69■□□□□ 0.74
P04224 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04224 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
P04224 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
P04224 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
P04224 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.67■□□□□ 0.74
P04224 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
P04224 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
P04224 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
P04224 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P04224 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
P04224 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P04224 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P04224 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
P04224 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P04224 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P04224 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
P04224 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P04224 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.66■□□□□ 0.74
P04224 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.66■□□□□ 0.74
P04224 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
P04224 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P04224 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04224 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04224 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04224 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04224 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.65■□□□□ 0.74
P04224 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04224 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04224 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04224 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04224 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
P04224 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.64■□□□□ 0.73
P04224 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P04224 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
P04224 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.64■□□□□ 0.73
P04224 Zfp131-205ENSMUST00000223812 663 ntBASIC19.64■□□□□ 0.73
P04224 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P04224 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
P04224 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
P04224 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P04224 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P04224 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
P04224 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
P04224 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
P04224 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P04224 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P04224 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P04224 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.62■□□□□ 0.73
P04224 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P04224 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.62■□□□□ 0.73
P04224 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms