Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.5■□□□□ 0.87
NgfP01139 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NgfP01139 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NgfP01139 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NgfP01139 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NgfP01139 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.49■□□□□ 0.87
NgfP01139 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NgfP01139 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NgfP01139 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.49■□□□□ 0.87
NgfP01139 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NgfP01139 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NgfP01139 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.48■□□□□ 0.87
NgfP01139 Gm5921-201ENSMUST00000075898 882 ntBASIC20.48■□□□□ 0.87
NgfP01139 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NgfP01139 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NgfP01139 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NgfP01139 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NgfP01139 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NgfP01139 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NgfP01139 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NgfP01139 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NgfP01139 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.45■□□□□ 0.86
NgfP01139 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NgfP01139 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NgfP01139 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NgfP01139 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NgfP01139 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NgfP01139 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NgfP01139 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.42■□□□□ 0.86
NgfP01139 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NgfP01139 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.41■□□□□ 0.86
NgfP01139 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NgfP01139 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NgfP01139 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
NgfP01139 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NgfP01139 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NgfP01139 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
NgfP01139 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NgfP01139 Gm5812-201ENSMUST00000061073 957 ntBASIC20.38■□□□□ 0.85
NgfP01139 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.38■□□□□ 0.85
NgfP01139 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NgfP01139 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NgfP01139 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NgfP01139 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NgfP01139 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NgfP01139 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NgfP01139 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NgfP01139 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NgfP01139 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NgfP01139 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NgfP01139 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NgfP01139 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NgfP01139 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NgfP01139 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.34■□□□□ 0.85
NgfP01139 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NgfP01139 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
NgfP01139 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.33■□□□□ 0.85
NgfP01139 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NgfP01139 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.33■□□□□ 0.84
NgfP01139 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NgfP01139 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NgfP01139 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NgfP01139 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.32■□□□□ 0.84
NgfP01139 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.32■□□□□ 0.84
NgfP01139 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NgfP01139 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NgfP01139 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NgfP01139 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NgfP01139 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.3■□□□□ 0.84
NgfP01139 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NgfP01139 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NgfP01139 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NgfP01139 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NgfP01139 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NgfP01139 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NgfP01139 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.28■□□□□ 0.84
NgfP01139 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.28■□□□□ 0.84
NgfP01139 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NgfP01139 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NgfP01139 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NgfP01139 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NgfP01139 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NgfP01139 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NgfP01139 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NgfP01139 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NgfP01139 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NgfP01139 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NgfP01139 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NgfP01139 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NgfP01139 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NgfP01139 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NgfP01139 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NgfP01139 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NgfP01139 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.24■□□□□ 0.83
NgfP01139 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.24■□□□□ 0.83
NgfP01139 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NgfP01139 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NgfP01139 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NgfP01139 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NgfP01139 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms