Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.13■□□□□ 0.81
Hdac3O88895 Gm37136-201ENSMUST00000194368 194 ntBASIC20.13■□□□□ 0.81
Hdac3O88895 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Hdac3O88895 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac3O88895 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac3O88895 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac3O88895 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac3O88895 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.12■□□□□ 0.81
Hdac3O88895 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.12■□□□□ 0.81
Hdac3O88895 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac3O88895 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.11■□□□□ 0.81
Hdac3O88895 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
Hdac3O88895 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac3O88895 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac3O88895 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac3O88895 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Hdac3O88895 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac3O88895 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac3O88895 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Hdac3O88895 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac3O88895 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.09■□□□□ 0.81
Hdac3O88895 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.09■□□□□ 0.81
Hdac3O88895 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac3O88895 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac3O88895 Gm7432-201ENSMUST00000210343 879 ntBASIC20.09■□□□□ 0.81
Hdac3O88895 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Hdac3O88895 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.09■□□□□ 0.81
Hdac3O88895 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac3O88895 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hdac3O88895 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hdac3O88895 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hdac3O88895 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac3O88895 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac3O88895 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.07■□□□□ 0.8
Hdac3O88895 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac3O88895 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac3O88895 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac3O88895 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac3O88895 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Hdac3O88895 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac3O88895 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac3O88895 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac3O88895 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac3O88895 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac3O88895 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hdac3O88895 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac3O88895 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac3O88895 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac3O88895 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hdac3O88895 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.04■□□□□ 0.8
Hdac3O88895 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hdac3O88895 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac3O88895 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac3O88895 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac3O88895 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Hdac3O88895 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac3O88895 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac3O88895 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac3O88895 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac3O88895 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac3O88895 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hdac3O88895 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.02■□□□□ 0.8
Hdac3O88895 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hdac3O88895 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hdac3O88895 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hdac3O88895 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hdac3O88895 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hdac3O88895 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hdac3O88895 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hdac3O88895 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hdac3O88895 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hdac3O88895 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac3O88895 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hdac3O88895 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hdac3O88895 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Hdac3O88895 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hdac3O88895 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac3O88895 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac3O88895 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hdac3O88895 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hdac3O88895 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.98■□□□□ 0.79
Hdac3O88895 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac3O88895 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac3O88895 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Hdac3O88895 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac3O88895 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.97■□□□□ 0.79
Hdac3O88895 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac3O88895 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac3O88895 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac3O88895 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac3O88895 Gm11599-201ENSMUST00000118720 878 ntBASIC19.96■□□□□ 0.79
Hdac3O88895 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac3O88895 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac3O88895 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac3O88895 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac3O88895 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac3O88895 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac3O88895 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.95■□□□□ 0.78
Hdac3O88895 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.94■□□□□ 0.78
Hdac3O88895 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms