Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.46■□□□□ 0.87
Pcdh12O55134 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh12O55134 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdh12O55134 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh12O55134 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh12O55134 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdh12O55134 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.45■□□□□ 0.86
Pcdh12O55134 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh12O55134 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdh12O55134 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdh12O55134 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.44■□□□□ 0.86
Pcdh12O55134 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Pcdh12O55134 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh12O55134 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh12O55134 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh12O55134 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh12O55134 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Pcdh12O55134 Mir3960-201ENSMUST00000198213 73 ntBASIC20.43■□□□□ 0.86
Pcdh12O55134 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.43■□□□□ 0.86
Pcdh12O55134 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.43■□□□□ 0.86
Pcdh12O55134 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh12O55134 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh12O55134 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdh12O55134 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh12O55134 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh12O55134 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdh12O55134 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdh12O55134 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh12O55134 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh12O55134 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh12O55134 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh12O55134 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdh12O55134 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.41■□□□□ 0.86
Pcdh12O55134 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdh12O55134 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh12O55134 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh12O55134 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh12O55134 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh12O55134 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdh12O55134 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdh12O55134 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh12O55134 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh12O55134 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh12O55134 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh12O55134 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh12O55134 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh12O55134 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh12O55134 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh12O55134 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh12O55134 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.38■□□□□ 0.85
Pcdh12O55134 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.38■□□□□ 0.85
Pcdh12O55134 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdh12O55134 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.37■□□□□ 0.85
Pcdh12O55134 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh12O55134 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Pcdh12O55134 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh12O55134 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh12O55134 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh12O55134 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh12O55134 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh12O55134 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh12O55134 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh12O55134 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh12O55134 Gm45364-201ENSMUST00000210883 159 ntBASIC20.35■□□□□ 0.85
Pcdh12O55134 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdh12O55134 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh12O55134 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh12O55134 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh12O55134 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh12O55134 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh12O55134 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.34■□□□□ 0.85
Pcdh12O55134 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh12O55134 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.34■□□□□ 0.85
Pcdh12O55134 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh12O55134 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh12O55134 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Pcdh12O55134 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh12O55134 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh12O55134 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdh12O55134 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh12O55134 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh12O55134 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh12O55134 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh12O55134 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdh12O55134 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh12O55134 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh12O55134 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh12O55134 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Pcdh12O55134 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh12O55134 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh12O55134 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh12O55134 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh12O55134 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh12O55134 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh12O55134 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh12O55134 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
Pcdh12O55134 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh12O55134 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh12O55134 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdh12O55134 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 123.8 ms