Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cntnap1O54991 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31■■■□□ 2.55
Cntnap1O54991 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
Cntnap1O54991 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC31■■■□□ 2.55
Cntnap1O54991 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC31■■■□□ 2.55
Cntnap1O54991 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cntnap1O54991 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
Cntnap1O54991 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC30.99■■■□□ 2.55
Cntnap1O54991 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC30.99■■■□□ 2.55
Cntnap1O54991 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Cntnap1O54991 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Cntnap1O54991 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC30.98■■■□□ 2.55
Cntnap1O54991 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Cntnap1O54991 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC30.97■■■□□ 2.55
Cntnap1O54991 Gm44428-201ENSMUST00000204474 874 ntBASIC30.95■■■□□ 2.55
Cntnap1O54991 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC30.94■■■□□ 2.54
Cntnap1O54991 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Cntnap1O54991 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Cntnap1O54991 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cntnap1O54991 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Cntnap1O54991 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Cntnap1O54991 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Cntnap1O54991 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
Cntnap1O54991 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cntnap1O54991 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Cntnap1O54991 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC30.92■■■□□ 2.54
Cntnap1O54991 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Cntnap1O54991 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC30.91■■■□□ 2.54
Cntnap1O54991 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Cntnap1O54991 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Cntnap1O54991 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC30.9■■■□□ 2.54
Cntnap1O54991 Etf1-202ENSMUST00000180351 108 ntBASIC30.9■■■□□ 2.54
Cntnap1O54991 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cntnap1O54991 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.89■■■□□ 2.54
Cntnap1O54991 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC30.89■■■□□ 2.54
Cntnap1O54991 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC30.89■■■□□ 2.54
Cntnap1O54991 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
Cntnap1O54991 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Cntnap1O54991 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Cntnap1O54991 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cntnap1O54991 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC30.88■■■□□ 2.53
Cntnap1O54991 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.88■■■□□ 2.53
Cntnap1O54991 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cntnap1O54991 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cntnap1O54991 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Cntnap1O54991 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Cntnap1O54991 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Cntnap1O54991 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Cntnap1O54991 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Cntnap1O54991 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Cntnap1O54991 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Cntnap1O54991 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Cntnap1O54991 Gm13241-201ENSMUST00000094493 780 ntBASIC30.84■■■□□ 2.53
Cntnap1O54991 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Cntnap1O54991 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC30.83■■■□□ 2.53
Cntnap1O54991 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
Cntnap1O54991 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.83■■■□□ 2.53
Cntnap1O54991 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Cntnap1O54991 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
Cntnap1O54991 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Cntnap1O54991 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Cntnap1O54991 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC30.81■■■□□ 2.52
Cntnap1O54991 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cntnap1O54991 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Cntnap1O54991 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Cntnap1O54991 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Cntnap1O54991 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Cntnap1O54991 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Cntnap1O54991 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Cntnap1O54991 Slc35b2-207ENSMUST00000226086 850 ntBASIC30.78■■■□□ 2.52
Cntnap1O54991 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
Cntnap1O54991 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Cntnap1O54991 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Cntnap1O54991 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
Cntnap1O54991 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Cntnap1O54991 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC30.76■■■□□ 2.51
Cntnap1O54991 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC30.76■■■□□ 2.51
Cntnap1O54991 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC30.76■■■□□ 2.51
Cntnap1O54991 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Cntnap1O54991 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cntnap1O54991 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Cntnap1O54991 Gm43034-201ENSMUST00000198678 1364 ntBASIC30.75■■■□□ 2.51
Cntnap1O54991 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cntnap1O54991 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cntnap1O54991 Gm21956-201ENSMUST00000179946 522 ntBASIC30.74■■■□□ 2.51
Cntnap1O54991 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Cntnap1O54991 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cntnap1O54991 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cntnap1O54991 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
Cntnap1O54991 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC30.72■■■□□ 2.51
Cntnap1O54991 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cntnap1O54991 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cntnap1O54991 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC30.71■■■□□ 2.51
Cntnap1O54991 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Cntnap1O54991 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Cntnap1O54991 Gm10232-201ENSMUST00000089221 720 ntBASIC30.69■■■□□ 2.5
Cntnap1O54991 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
Cntnap1O54991 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Cntnap1O54991 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC30.68■■■□□ 2.5
Cntnap1O54991 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC30.66■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms