Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Matn3O35701 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.68■□□□□ 0.9
Matn3O35701 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Matn3O35701 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Matn3O35701 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Matn3O35701 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Matn3O35701 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Matn3O35701 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Matn3O35701 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Matn3O35701 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Matn3O35701 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Matn3O35701 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Matn3O35701 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Matn3O35701 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Matn3O35701 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Matn3O35701 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Matn3O35701 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Matn3O35701 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Matn3O35701 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Matn3O35701 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Matn3O35701 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Matn3O35701 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Matn3O35701 Particl-201ENSMUST00000205370 1560 ntBASIC20.63■□□□□ 0.89
Matn3O35701 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Matn3O35701 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Matn3O35701 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Matn3O35701 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.62■□□□□ 0.89
Matn3O35701 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Matn3O35701 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Matn3O35701 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Matn3O35701 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Matn3O35701 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Matn3O35701 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Matn3O35701 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Matn3O35701 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Matn3O35701 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Matn3O35701 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Matn3O35701 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Matn3O35701 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Matn3O35701 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Matn3O35701 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Matn3O35701 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Matn3O35701 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Matn3O35701 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Matn3O35701 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.59■□□□□ 0.89
Matn3O35701 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Matn3O35701 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.58■□□□□ 0.89
Matn3O35701 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Matn3O35701 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Matn3O35701 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Matn3O35701 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.58■□□□□ 0.88
Matn3O35701 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.57■□□□□ 0.88
Matn3O35701 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Matn3O35701 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Matn3O35701 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Matn3O35701 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.56■□□□□ 0.88
Matn3O35701 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.56■□□□□ 0.88
Matn3O35701 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Matn3O35701 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Matn3O35701 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Matn3O35701 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Matn3O35701 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Matn3O35701 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Matn3O35701 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Matn3O35701 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Matn3O35701 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.55■□□□□ 0.88
Matn3O35701 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.55■□□□□ 0.88
Matn3O35701 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Matn3O35701 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Matn3O35701 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Matn3O35701 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.54■□□□□ 0.88
Matn3O35701 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Matn3O35701 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Matn3O35701 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Matn3O35701 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Matn3O35701 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Matn3O35701 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.53■□□□□ 0.88
Matn3O35701 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Matn3O35701 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Matn3O35701 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Matn3O35701 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Matn3O35701 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Matn3O35701 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.52■□□□□ 0.88
Matn3O35701 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Matn3O35701 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Matn3O35701 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Matn3O35701 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Matn3O35701 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Matn3O35701 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Matn3O35701 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Matn3O35701 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Matn3O35701 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Matn3O35701 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Matn3O35701 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.5■□□□□ 0.87
Matn3O35701 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Matn3O35701 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Matn3O35701 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Matn3O35701 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Matn3O35701 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Matn3O35701 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms