Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ercc2O08811 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ercc2O08811 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ercc2O08811 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ercc2O08811 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Ercc2O08811 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ercc2O08811 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.3■■□□□ 1.32
Ercc2O08811 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ercc2O08811 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ercc2O08811 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ercc2O08811 Gm6311-201ENSMUST00000073790 878 ntBASIC23.29■■□□□ 1.32
Ercc2O08811 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ercc2O08811 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ercc2O08811 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ercc2O08811 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.28■■□□□ 1.32
Ercc2O08811 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.28■■□□□ 1.32
Ercc2O08811 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.28■■□□□ 1.32
Ercc2O08811 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.28■■□□□ 1.32
Ercc2O08811 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ercc2O08811 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ercc2O08811 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ercc2O08811 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ercc2O08811 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ercc2O08811 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ercc2O08811 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Ercc2O08811 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ercc2O08811 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Ercc2O08811 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.25■■□□□ 1.31
Ercc2O08811 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ercc2O08811 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ercc2O08811 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ercc2O08811 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Ercc2O08811 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ercc2O08811 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Ercc2O08811 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ercc2O08811 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ercc2O08811 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ercc2O08811 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.22■■□□□ 1.31
Ercc2O08811 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
Ercc2O08811 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ercc2O08811 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ercc2O08811 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.21■■□□□ 1.31
Ercc2O08811 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ercc2O08811 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.21■■□□□ 1.31
Ercc2O08811 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.21■■□□□ 1.31
Ercc2O08811 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ercc2O08811 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.21■■□□□ 1.31
Ercc2O08811 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ercc2O08811 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ercc2O08811 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Ercc2O08811 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Ercc2O08811 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ercc2O08811 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ercc2O08811 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ercc2O08811 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.19■■□□□ 1.3
Ercc2O08811 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ercc2O08811 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ercc2O08811 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ercc2O08811 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ercc2O08811 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ercc2O08811 Terc-201ENSMUST00000082862 423 ntBASIC23.17■■□□□ 1.3
Ercc2O08811 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ercc2O08811 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ercc2O08811 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ercc2O08811 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.16■■□□□ 1.3
Ercc2O08811 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ercc2O08811 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ercc2O08811 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ercc2O08811 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ercc2O08811 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ercc2O08811 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ercc2O08811 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ercc2O08811 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.14■■□□□ 1.29
Ercc2O08811 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Ercc2O08811 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ercc2O08811 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ercc2O08811 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ercc2O08811 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ercc2O08811 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ercc2O08811 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ercc2O08811 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ercc2O08811 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ercc2O08811 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ercc2O08811 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ercc2O08811 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ercc2O08811 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ercc2O08811 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ercc2O08811 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ercc2O08811 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ercc2O08811 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.11■■□□□ 1.29
Ercc2O08811 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.11■■□□□ 1.29
Ercc2O08811 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Ercc2O08811 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ercc2O08811 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ercc2O08811 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ercc2O08811 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ercc2O08811 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ercc2O08811 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ercc2O08811 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ercc2O08811 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms