Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Gm3139J3QK78 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Gm3139J3QK78 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Gm3139J3QK78 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Gm3139J3QK78 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Gm3139J3QK78 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Gm3139J3QK78 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Gm3139J3QK78 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Gm3139J3QK78 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Gm3139J3QK78 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Gm3139J3QK78 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.78■■□□□ 1.24
Gm3139J3QK78 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.77■■□□□ 1.24
Gm3139J3QK78 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Gm3139J3QK78 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Gm3139J3QK78 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Gm3139J3QK78 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Gm3139J3QK78 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.76■■□□□ 1.23
Gm3139J3QK78 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Gm3139J3QK78 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Gm3139J3QK78 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm3139J3QK78 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Gm3139J3QK78 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Gm3139J3QK78 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.75■■□□□ 1.23
Gm3139J3QK78 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm3139J3QK78 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.75■■□□□ 1.23
Gm3139J3QK78 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Gm3139J3QK78 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Gm3139J3QK78 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Gm3139J3QK78 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Gm3139J3QK78 Cap2-205ENSMUST00000225824 1634 ntBASIC22.73■■□□□ 1.23
Gm3139J3QK78 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Gm3139J3QK78 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm3139J3QK78 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3139J3QK78 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3139J3QK78 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.72■■□□□ 1.23
Gm3139J3QK78 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.72■■□□□ 1.23
Gm3139J3QK78 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3139J3QK78 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3139J3QK78 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm3139J3QK78 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3139J3QK78 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3139J3QK78 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3139J3QK78 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.71■■□□□ 1.23
Gm3139J3QK78 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.71■■□□□ 1.23
Gm3139J3QK78 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.71■■□□□ 1.23
Gm3139J3QK78 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3139J3QK78 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3139J3QK78 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Gm3139J3QK78 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Gm3139J3QK78 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Gm3139J3QK78 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm3139J3QK78 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.7■■□□□ 1.22
Gm3139J3QK78 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm3139J3QK78 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.7■■□□□ 1.22
Gm3139J3QK78 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm3139J3QK78 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.22
Gm3139J3QK78 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm3139J3QK78 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm3139J3QK78 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Gm3139J3QK78 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Gm3139J3QK78 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Gm3139J3QK78 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.68■■□□□ 1.22
Gm3139J3QK78 Gm12366-201ENSMUST00000121722 873 ntBASIC22.68■■□□□ 1.22
Gm3139J3QK78 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.68■■□□□ 1.22
Gm3139J3QK78 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm3139J3QK78 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.68■■□□□ 1.22
Gm3139J3QK78 Gm5786-201ENSMUST00000085368 882 ntBASIC22.68■■□□□ 1.22
Gm3139J3QK78 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Gm3139J3QK78 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
Gm3139J3QK78 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.67■■□□□ 1.22
Gm3139J3QK78 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Gm3139J3QK78 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3139J3QK78 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3139J3QK78 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.66■■□□□ 1.22
Gm3139J3QK78 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3139J3QK78 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm3139J3QK78 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Gm3139J3QK78 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.66■■□□□ 1.22
Gm3139J3QK78 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3139J3QK78 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.65■■□□□ 1.22
Gm3139J3QK78 Gm27502-201ENSMUST00000183495 199 ntBASIC22.65■■□□□ 1.22
Gm3139J3QK78 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3139J3QK78 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3139J3QK78 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3139J3QK78 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Gm3139J3QK78 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Gm3139J3QK78 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Gm3139J3QK78 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Gm3139J3QK78 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm3139J3QK78 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Gm3139J3QK78 Gm44428-201ENSMUST00000204474 874 ntBASIC22.63■■□□□ 1.21
Gm3139J3QK78 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.63■■□□□ 1.21
Gm3139J3QK78 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm3139J3QK78 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Gm3139J3QK78 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm3139J3QK78 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Gm3139J3QK78 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Gm3139J3QK78 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Gm3139J3QK78 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm3139J3QK78 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms