Protein–RNA interactions for Protein: G5E870

Trip12, E3 ubiquitin-protein ligase TRIP12, mousemouse

Known RBP Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trip12G5E870 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trip12G5E870 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Trip12G5E870 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trip12G5E870 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trip12G5E870 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trip12G5E870 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.13■□□□□ 0.97
Trip12G5E870 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trip12G5E870 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.12■□□□□ 0.97
Trip12G5E870 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trip12G5E870 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trip12G5E870 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trip12G5E870 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.11■□□□□ 0.97
Trip12G5E870 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trip12G5E870 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trip12G5E870 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trip12G5E870 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trip12G5E870 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trip12G5E870 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trip12G5E870 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trip12G5E870 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.09■□□□□ 0.97
Trip12G5E870 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trip12G5E870 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trip12G5E870 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.09■□□□□ 0.97
Trip12G5E870 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trip12G5E870 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trip12G5E870 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trip12G5E870 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trip12G5E870 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.08■□□□□ 0.97
Trip12G5E870 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Trip12G5E870 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Trip12G5E870 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trip12G5E870 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trip12G5E870 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trip12G5E870 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trip12G5E870 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trip12G5E870 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trip12G5E870 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trip12G5E870 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trip12G5E870 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trip12G5E870 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.05■□□□□ 0.96
Trip12G5E870 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.04■□□□□ 0.96
Trip12G5E870 Gm43566-201ENSMUST00000196851 808 ntBASIC21.04■□□□□ 0.96
Trip12G5E870 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.04■□□□□ 0.96
Trip12G5E870 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trip12G5E870 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Trip12G5E870 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trip12G5E870 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trip12G5E870 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trip12G5E870 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.03■□□□□ 0.96
Trip12G5E870 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trip12G5E870 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Trip12G5E870 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trip12G5E870 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trip12G5E870 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trip12G5E870 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trip12G5E870 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.02■□□□□ 0.96
Trip12G5E870 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.02■□□□□ 0.96
Trip12G5E870 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.01■□□□□ 0.95
Trip12G5E870 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trip12G5E870 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trip12G5E870 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trip12G5E870 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trip12G5E870 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trip12G5E870 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trip12G5E870 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21■□□□□ 0.95
Trip12G5E870 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trip12G5E870 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trip12G5E870 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trip12G5E870 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21■□□□□ 0.95
Trip12G5E870 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Trip12G5E870 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trip12G5E870 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.99■□□□□ 0.95
Trip12G5E870 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trip12G5E870 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.99■□□□□ 0.95
Trip12G5E870 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.99■□□□□ 0.95
Trip12G5E870 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.99■□□□□ 0.95
Trip12G5E870 Gm44428-201ENSMUST00000204474 874 ntBASIC20.99■□□□□ 0.95
Trip12G5E870 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trip12G5E870 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trip12G5E870 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trip12G5E870 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trip12G5E870 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trip12G5E870 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trip12G5E870 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trip12G5E870 Gm14117-201ENSMUST00000122417 843 ntBASIC20.97■□□□□ 0.95
Trip12G5E870 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trip12G5E870 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trip12G5E870 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trip12G5E870 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trip12G5E870 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Trip12G5E870 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trip12G5E870 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trip12G5E870 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trip12G5E870 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trip12G5E870 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trip12G5E870 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trip12G5E870 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.95■□□□□ 0.94
Trip12G5E870 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trip12G5E870 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trip12G5E870 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms