Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.93■□□□□ 0.46
Col6a5A6H584 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
Col6a5A6H584 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col6a5A6H584 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.92■□□□□ 0.46
Col6a5A6H584 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col6a5A6H584 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col6a5A6H584 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col6a5A6H584 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col6a5A6H584 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.92■□□□□ 0.46
Col6a5A6H584 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.91■□□□□ 0.46
Col6a5A6H584 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a5A6H584 Gm10232-201ENSMUST00000089221 720 ntBASIC17.91■□□□□ 0.46
Col6a5A6H584 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a5A6H584 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a5A6H584 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Col6a5A6H584 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a5A6H584 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col6a5A6H584 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col6a5A6H584 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col6a5A6H584 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.89■□□□□ 0.46
Col6a5A6H584 Etf1-202ENSMUST00000180351 108 ntBASIC17.89■□□□□ 0.45
Col6a5A6H584 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.89■□□□□ 0.45
Col6a5A6H584 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.89■□□□□ 0.45
Col6a5A6H584 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a5A6H584 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a5A6H584 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a5A6H584 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col6a5A6H584 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.88■□□□□ 0.45
Col6a5A6H584 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.87■□□□□ 0.45
Col6a5A6H584 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a5A6H584 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a5A6H584 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a5A6H584 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a5A6H584 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Col6a5A6H584 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a5A6H584 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a5A6H584 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col6a5A6H584 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Col6a5A6H584 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Col6a5A6H584 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a5A6H584 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a5A6H584 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col6a5A6H584 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col6a5A6H584 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.85■□□□□ 0.45
Col6a5A6H584 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.85■□□□□ 0.45
Col6a5A6H584 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a5A6H584 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a5A6H584 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col6a5A6H584 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a5A6H584 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.84■□□□□ 0.45
Col6a5A6H584 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a5A6H584 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col6a5A6H584 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col6a5A6H584 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.83■□□□□ 0.45
Col6a5A6H584 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col6a5A6H584 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col6a5A6H584 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a5A6H584 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.82■□□□□ 0.44
Col6a5A6H584 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.82■□□□□ 0.44
Col6a5A6H584 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a5A6H584 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a5A6H584 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.81■□□□□ 0.44
Col6a5A6H584 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.81■□□□□ 0.44
Col6a5A6H584 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a5A6H584 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.81■□□□□ 0.44
Col6a5A6H584 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.81■□□□□ 0.44
Col6a5A6H584 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.81■□□□□ 0.44
Col6a5A6H584 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col6a5A6H584 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a5A6H584 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a5A6H584 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.8■□□□□ 0.44
Col6a5A6H584 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.8■□□□□ 0.44
Col6a5A6H584 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a5A6H584 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a5A6H584 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Col6a5A6H584 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a5A6H584 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Col6a5A6H584 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.79■□□□□ 0.44
Col6a5A6H584 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.79■□□□□ 0.44
Col6a5A6H584 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a5A6H584 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a5A6H584 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.78■□□□□ 0.44
Col6a5A6H584 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a5A6H584 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Col6a5A6H584 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a5A6H584 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col6a5A6H584 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col6a5A6H584 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.77■□□□□ 0.43
Col6a5A6H584 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.77■□□□□ 0.43
Col6a5A6H584 Terc-201ENSMUST00000082862 423 ntBASIC17.76■□□□□ 0.43
Col6a5A6H584 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a5A6H584 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.75■□□□□ 0.43
Col6a5A6H584 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col6a5A6H584 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col6a5A6H584 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col6a5A6H584 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a5A6H584 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a5A6H584 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a5A6H584 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a5A6H584 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms