Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trav12-1A0N8R1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav12-1A0N8R1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav12-1A0N8R1 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.97■□□□□ 0.63
Trav12-1A0N8R1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Trav12-1A0N8R1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Trav12-1A0N8R1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav12-1A0N8R1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav12-1A0N8R1 Gm37136-201ENSMUST00000194368 194 ntBASIC18.96■□□□□ 0.63
Trav12-1A0N8R1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
Trav12-1A0N8R1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trav12-1A0N8R1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav12-1A0N8R1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trav12-1A0N8R1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12-1A0N8R1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav12-1A0N8R1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav12-1A0N8R1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav12-1A0N8R1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav12-1A0N8R1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12-1A0N8R1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trav12-1A0N8R1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav12-1A0N8R1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trav12-1A0N8R1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12-1A0N8R1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.93■□□□□ 0.62
Trav12-1A0N8R1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12-1A0N8R1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12-1A0N8R1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12-1A0N8R1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12-1A0N8R1 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.92■□□□□ 0.62
Trav12-1A0N8R1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12-1A0N8R1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12-1A0N8R1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12-1A0N8R1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12-1A0N8R1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12-1A0N8R1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12-1A0N8R1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Trav12-1A0N8R1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12-1A0N8R1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trav12-1A0N8R1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12-1A0N8R1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trav12-1A0N8R1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12-1A0N8R1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.89■□□□□ 0.61
Trav12-1A0N8R1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.88■□□□□ 0.61
Trav12-1A0N8R1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12-1A0N8R1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12-1A0N8R1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12-1A0N8R1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12-1A0N8R1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav12-1A0N8R1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12-1A0N8R1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.87■□□□□ 0.61
Trav12-1A0N8R1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trav12-1A0N8R1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12-1A0N8R1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12-1A0N8R1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.86■□□□□ 0.61
Trav12-1A0N8R1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12-1A0N8R1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12-1A0N8R1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12-1A0N8R1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12-1A0N8R1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12-1A0N8R1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-1A0N8R1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-1A0N8R1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-1A0N8R1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-1A0N8R1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12-1A0N8R1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Trav12-1A0N8R1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12-1A0N8R1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12-1A0N8R1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12-1A0N8R1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12-1A0N8R1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12-1A0N8R1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trav12-1A0N8R1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trav12-1A0N8R1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav12-1A0N8R1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12-1A0N8R1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12-1A0N8R1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12-1A0N8R1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.82■□□□□ 0.6
Trav12-1A0N8R1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12-1A0N8R1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12-1A0N8R1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12-1A0N8R1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12-1A0N8R1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12-1A0N8R1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Trav12-1A0N8R1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav12-1A0N8R1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trav12-1A0N8R1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.81■□□□□ 0.6
Trav12-1A0N8R1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.81■□□□□ 0.6
Trav12-1A0N8R1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Trav12-1A0N8R1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav12-1A0N8R1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav12-1A0N8R1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav12-1A0N8R1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12-1A0N8R1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12-1A0N8R1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12-1A0N8R1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12-1A0N8R1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trav12-1A0N8R1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav12-1A0N8R1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.78■□□□□ 0.6
Trav12-1A0N8R1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav12-1A0N8R1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms