Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC50.05■■■■■ 5.6
Gm35339A0A140LHH9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC50.04■■■■■ 5.6
Gm35339A0A140LHH9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC50.04■■■■■ 5.6
Gm35339A0A140LHH9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC50.04■■■■■ 5.6
Gm35339A0A140LHH9 Rps24-207ENSMUST00000224568 714 ntBASIC50.03■■■■■ 5.6
Gm35339A0A140LHH9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC50.02■■■■■ 5.6
Gm35339A0A140LHH9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC50.01■■■■■ 5.6
Gm35339A0A140LHH9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC50■■■■■ 5.59
Gm35339A0A140LHH9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC49.99■■■■■ 5.59
Gm35339A0A140LHH9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC49.99■■■■■ 5.59
Gm35339A0A140LHH9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC49.98■■■■■ 5.59
Gm35339A0A140LHH9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC49.98■■■■■ 5.59
Gm35339A0A140LHH9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC49.97■■■■■ 5.59
Gm35339A0A140LHH9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC49.97■■■■■ 5.59
Gm35339A0A140LHH9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC49.96■■■■■ 5.59
Gm35339A0A140LHH9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC49.96■■■■■ 5.59
Gm35339A0A140LHH9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC49.96■■■■■ 5.59
Gm35339A0A140LHH9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC49.95■■■■■ 5.59
Gm35339A0A140LHH9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC49.95■■■■■ 5.59
Gm35339A0A140LHH9 Gm14117-201ENSMUST00000122417 843 ntBASIC49.94■■■■■ 5.59
Gm35339A0A140LHH9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC49.92■■■■■ 5.58
Gm35339A0A140LHH9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC49.91■■■■■ 5.58
Gm35339A0A140LHH9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC49.9■■■■■ 5.58
Gm35339A0A140LHH9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC49.89■■■■■ 5.58
Gm35339A0A140LHH9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC49.89■■■■■ 5.58
Gm35339A0A140LHH9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC49.89■■■■■ 5.58
Gm35339A0A140LHH9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC49.88■■■■■ 5.58
Gm35339A0A140LHH9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC49.86■■■■■ 5.57
Gm35339A0A140LHH9 Gm45102-201ENSMUST00000207427 857 ntBASIC49.86■■■■■ 5.57
Gm35339A0A140LHH9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC49.85■■■■■ 5.57
Gm35339A0A140LHH9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC49.85■■■■■ 5.57
Gm35339A0A140LHH9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC49.85■■■■■ 5.57
Gm35339A0A140LHH9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC49.84■■■■■ 5.57
Gm35339A0A140LHH9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC49.84■■■■■ 5.57
Gm35339A0A140LHH9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC49.82■■■■■ 5.57
Gm35339A0A140LHH9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC49.82■■■■■ 5.57
Gm35339A0A140LHH9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC49.8■■■■■ 5.56
Gm35339A0A140LHH9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC49.79■■■■■ 5.56
Gm35339A0A140LHH9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC49.79■■■■■ 5.56
Gm35339A0A140LHH9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC49.78■■■■■ 5.56
Gm35339A0A140LHH9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC49.77■■■■■ 5.56
Gm35339A0A140LHH9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC49.77■■■■■ 5.56
Gm35339A0A140LHH9 Nsd1-203ENSMUST00000224156 1149 ntBASIC49.76■■■■■ 5.56
Gm35339A0A140LHH9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC49.75■■■■■ 5.56
Gm35339A0A140LHH9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC49.74■■■■■ 5.55
Gm35339A0A140LHH9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC49.74■■■■■ 5.55
Gm35339A0A140LHH9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC49.74■■■■■ 5.55
Gm35339A0A140LHH9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC49.73■■■■■ 5.55
Gm35339A0A140LHH9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC49.71■■■■■ 5.55
Gm35339A0A140LHH9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC49.7■■■■■ 5.55
Gm35339A0A140LHH9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC49.7■■■■■ 5.55
Gm35339A0A140LHH9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC49.7■■■■■ 5.55
Gm35339A0A140LHH9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC49.7■■■■■ 5.55
Gm35339A0A140LHH9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC49.67■■■■■ 5.54
Gm35339A0A140LHH9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC49.67■■■■■ 5.54
Gm35339A0A140LHH9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC49.66■■■■■ 5.54
Gm35339A0A140LHH9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC49.66■■■■■ 5.54
Gm35339A0A140LHH9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC49.64■■■■■ 5.54
Gm35339A0A140LHH9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC49.63■■■■■ 5.54
Gm35339A0A140LHH9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC49.63■■■■■ 5.53
Gm35339A0A140LHH9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC49.63■■■■■ 5.53
Gm35339A0A140LHH9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC49.61■■■■■ 5.53
Gm35339A0A140LHH9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC49.61■■■■■ 5.53
Gm35339A0A140LHH9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC49.6■■■■■ 5.53
Gm35339A0A140LHH9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC49.59■■■■■ 5.53
Gm35339A0A140LHH9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC49.59■■■■■ 5.53
Gm35339A0A140LHH9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC49.58■■■■■ 5.53
Gm35339A0A140LHH9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC49.57■■■■■ 5.53
Gm35339A0A140LHH9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC49.56■■■■■ 5.52
Gm35339A0A140LHH9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC49.56■■■■■ 5.52
Gm35339A0A140LHH9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC49.56■■■■■ 5.52
Gm35339A0A140LHH9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC49.56■■■■■ 5.52
Gm35339A0A140LHH9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC49.56■■■■■ 5.52
Gm35339A0A140LHH9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC49.56■■■■■ 5.52
Gm35339A0A140LHH9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC49.55■■■■■ 5.52
Gm35339A0A140LHH9 Gm37847-201ENSMUST00000192163 1497 ntBASIC49.53■■■■■ 5.52
Gm35339A0A140LHH9 Gm31748-201ENSMUST00000194938 1497 ntBASIC49.53■■■■■ 5.52
Gm35339A0A140LHH9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC49.53■■■■■ 5.52
Gm35339A0A140LHH9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC49.52■■■■■ 5.52
Gm35339A0A140LHH9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC49.52■■■■■ 5.52
Gm35339A0A140LHH9 Gm9959-201ENSMUST00000068277 390 ntBASIC49.52■■■■■ 5.52
Gm35339A0A140LHH9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC49.5■■■■■ 5.51
Gm35339A0A140LHH9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC49.5■■■■■ 5.51
Gm35339A0A140LHH9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC49.49■■■■■ 5.51
Gm35339A0A140LHH9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC49.48■■■■■ 5.51
Gm35339A0A140LHH9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC49.48■■■■■ 5.51
Gm35339A0A140LHH9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC49.48■■■■■ 5.51
Gm35339A0A140LHH9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC49.48■■■■■ 5.51
Gm35339A0A140LHH9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC49.47■■■■■ 5.51
Gm35339A0A140LHH9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC49.46■■■■■ 5.51
Gm35339A0A140LHH9 Gm4419-202ENSMUST00000226239 1431 ntBASIC49.46■■■■■ 5.51
Gm35339A0A140LHH9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC49.45■■■■■ 5.51
Gm35339A0A140LHH9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC49.45■■■■■ 5.51
Gm35339A0A140LHH9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC49.45■■■■■ 5.51
Gm35339A0A140LHH9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC49.45■■■■■ 5.51
Gm35339A0A140LHH9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC49.45■■■■■ 5.51
Gm35339A0A140LHH9 Gm43445-201ENSMUST00000198564 2091 ntBASIC49.45■■■■■ 5.51
Gm35339A0A140LHH9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC49.43■■■■■ 5.5
Gm35339A0A140LHH9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC49.43■■■■■ 5.5
Gm35339A0A140LHH9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC49.43■■■■■ 5.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms