Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-4A0A0G2JFX3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav13d-4A0A0G2JFX3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-4A0A0G2JFX3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-4A0A0G2JFX3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav13d-4A0A0G2JFX3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav13d-4A0A0G2JFX3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.43■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms