Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-1A0A0G2JEV5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-1A0A0G2JEV5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-1A0A0G2JEV5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav7-1A0A0G2JEV5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-1A0A0G2JEV5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-1A0A0G2JEV5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav7-1A0A0G2JEV5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-1A0A0G2JEV5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-1A0A0G2JEV5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav7-1A0A0G2JEV5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-1A0A0G2JEV5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-1A0A0G2JEV5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-1A0A0G2JEV5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-1A0A0G2JEV5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-1A0A0G2JEV5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-1A0A0G2JEV5 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.42■□□□□ 0.38
Trav7-1A0A0G2JEV5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-1A0A0G2JEV5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-1A0A0G2JEV5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-1A0A0G2JEV5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-1A0A0G2JEV5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav7-1A0A0G2JEV5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-1A0A0G2JEV5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-1A0A0G2JEV5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-1A0A0G2JEV5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav7-1A0A0G2JEV5 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.4■□□□□ 0.38
Trav7-1A0A0G2JEV5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-1A0A0G2JEV5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav7-1A0A0G2JEV5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-1A0A0G2JEV5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-1A0A0G2JEV5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-1A0A0G2JEV5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav7-1A0A0G2JEV5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav7-1A0A0G2JEV5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Trav7-1A0A0G2JEV5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav7-1A0A0G2JEV5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav7-1A0A0G2JEV5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav7-1A0A0G2JEV5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-1A0A0G2JEV5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-1A0A0G2JEV5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-1A0A0G2JEV5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Trav7-1A0A0G2JEV5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav7-1A0A0G2JEV5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Trav7-1A0A0G2JEV5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav7-1A0A0G2JEV5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-1A0A0G2JEV5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-1A0A0G2JEV5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-1A0A0G2JEV5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-1A0A0G2JEV5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-1A0A0G2JEV5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trav7-1A0A0G2JEV5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Trav7-1A0A0G2JEV5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.37■□□□□ 0.37
Trav7-1A0A0G2JEV5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-1A0A0G2JEV5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-1A0A0G2JEV5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-1A0A0G2JEV5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Trav7-1A0A0G2JEV5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-1A0A0G2JEV5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7-1A0A0G2JEV5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7-1A0A0G2JEV5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7-1A0A0G2JEV5 Nkain2-201ENSMUST00000092602 558 ntBASIC17.35■□□□□ 0.37
Trav7-1A0A0G2JEV5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav7-1A0A0G2JEV5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7-1A0A0G2JEV5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7-1A0A0G2JEV5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Trav7-1A0A0G2JEV5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7-1A0A0G2JEV5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-1A0A0G2JEV5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-1A0A0G2JEV5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-1A0A0G2JEV5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-1A0A0G2JEV5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav7-1A0A0G2JEV5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-1A0A0G2JEV5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav7-1A0A0G2JEV5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav7-1A0A0G2JEV5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav7-1A0A0G2JEV5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav7-1A0A0G2JEV5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav7-1A0A0G2JEV5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7-1A0A0G2JEV5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trav7-1A0A0G2JEV5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7-1A0A0G2JEV5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav7-1A0A0G2JEV5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7-1A0A0G2JEV5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7-1A0A0G2JEV5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.31■□□□□ 0.36
Trav7-1A0A0G2JEV5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav7-1A0A0G2JEV5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7-1A0A0G2JEV5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.31■□□□□ 0.36
Trav7-1A0A0G2JEV5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7-1A0A0G2JEV5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav7-1A0A0G2JEV5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7-1A0A0G2JEV5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trav7-1A0A0G2JEV5 Gm37136-201ENSMUST00000194368 194 ntBASIC17.3■□□□□ 0.36
Trav7-1A0A0G2JEV5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7-1A0A0G2JEV5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7-1A0A0G2JEV5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav7-1A0A0G2JEV5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-1A0A0G2JEV5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-1A0A0G2JEV5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-1A0A0G2JEV5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms