Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav3n-3A0A0G2JEM0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav3n-3A0A0G2JEM0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav3n-3A0A0G2JEM0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.06■□□□□ 0.32
Trav3n-3A0A0G2JEM0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3n-3A0A0G2JEM0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3n-3A0A0G2JEM0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav3n-3A0A0G2JEM0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3n-3A0A0G2JEM0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3n-3A0A0G2JEM0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav3n-3A0A0G2JEM0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3n-3A0A0G2JEM0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.94■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms