Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv26A0A0B4J1P5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv26A0A0B4J1P5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Trbv26A0A0B4J1P5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv26A0A0B4J1P5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv26A0A0B4J1P5 Gm9812-201ENSMUST00000061934 968 ntBASIC18.81■□□□□ 0.6
Trbv26A0A0B4J1P5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv26A0A0B4J1P5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv26A0A0B4J1P5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv26A0A0B4J1P5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trbv26A0A0B4J1P5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.8■□□□□ 0.6
Trbv26A0A0B4J1P5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv26A0A0B4J1P5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv26A0A0B4J1P5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv26A0A0B4J1P5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv26A0A0B4J1P5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.79■□□□□ 0.6
Trbv26A0A0B4J1P5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv26A0A0B4J1P5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trbv26A0A0B4J1P5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.78■□□□□ 0.6
Trbv26A0A0B4J1P5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv26A0A0B4J1P5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trbv26A0A0B4J1P5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv26A0A0B4J1P5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv26A0A0B4J1P5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv26A0A0B4J1P5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trbv26A0A0B4J1P5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.77■□□□□ 0.6
Trbv26A0A0B4J1P5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Trbv26A0A0B4J1P5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv26A0A0B4J1P5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.77■□□□□ 0.59
Trbv26A0A0B4J1P5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv26A0A0B4J1P5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv26A0A0B4J1P5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trbv26A0A0B4J1P5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv26A0A0B4J1P5 Scarna2-201ENSMUST00000157560 414 ntBASIC18.76■□□□□ 0.59
Trbv26A0A0B4J1P5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv26A0A0B4J1P5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv26A0A0B4J1P5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv26A0A0B4J1P5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv26A0A0B4J1P5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv26A0A0B4J1P5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Trbv26A0A0B4J1P5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv26A0A0B4J1P5 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.75■□□□□ 0.59
Trbv26A0A0B4J1P5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv26A0A0B4J1P5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trbv26A0A0B4J1P5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trbv26A0A0B4J1P5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.75■□□□□ 0.59
Trbv26A0A0B4J1P5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trbv26A0A0B4J1P5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv26A0A0B4J1P5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv26A0A0B4J1P5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv26A0A0B4J1P5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.74■□□□□ 0.59
Trbv26A0A0B4J1P5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv26A0A0B4J1P5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv26A0A0B4J1P5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trbv26A0A0B4J1P5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv26A0A0B4J1P5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv26A0A0B4J1P5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv26A0A0B4J1P5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.73■□□□□ 0.59
Trbv26A0A0B4J1P5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trbv26A0A0B4J1P5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.73■□□□□ 0.59
Trbv26A0A0B4J1P5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv26A0A0B4J1P5 Gm9806-201ENSMUST00000051080 552 ntBASIC18.73■□□□□ 0.59
Trbv26A0A0B4J1P5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.73■□□□□ 0.59
Trbv26A0A0B4J1P5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv26A0A0B4J1P5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv26A0A0B4J1P5 Gm11687-201ENSMUST00000118911 886 ntBASIC18.72■□□□□ 0.59
Trbv26A0A0B4J1P5 Gm16437-201ENSMUST00000025669 507 ntBASIC18.72■□□□□ 0.59
Trbv26A0A0B4J1P5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv26A0A0B4J1P5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv26A0A0B4J1P5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv26A0A0B4J1P5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv26A0A0B4J1P5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv26A0A0B4J1P5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv26A0A0B4J1P5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv26A0A0B4J1P5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv26A0A0B4J1P5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv26A0A0B4J1P5 Terc-201ENSMUST00000082862 423 ntBASIC18.7■□□□□ 0.58
Trbv26A0A0B4J1P5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv26A0A0B4J1P5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv26A0A0B4J1P5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv26A0A0B4J1P5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv26A0A0B4J1P5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv26A0A0B4J1P5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv26A0A0B4J1P5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.68■□□□□ 0.58
Trbv26A0A0B4J1P5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv26A0A0B4J1P5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv26A0A0B4J1P5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv26A0A0B4J1P5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv26A0A0B4J1P5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trbv26A0A0B4J1P5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv26A0A0B4J1P5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv26A0A0B4J1P5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv26A0A0B4J1P5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv26A0A0B4J1P5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv26A0A0B4J1P5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv26A0A0B4J1P5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv26A0A0B4J1P5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv26A0A0B4J1P5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.66■□□□□ 0.58
Trbv26A0A0B4J1P5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.66■□□□□ 0.58
Trbv26A0A0B4J1P5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms