Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.57■□□□□ 0.08
Trav4-3A0A0B4J1K1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-3A0A0B4J1K1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-3A0A0B4J1K1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav4-3A0A0B4J1K1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav4-3A0A0B4J1K1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4-3A0A0B4J1K1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav4-3A0A0B4J1K1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-3A0A0B4J1K1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-3A0A0B4J1K1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-3A0A0B4J1K1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-3A0A0B4J1K1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4-3A0A0B4J1K1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-3A0A0B4J1K1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-3A0A0B4J1K1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-3A0A0B4J1K1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-3A0A0B4J1K1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4-3A0A0B4J1K1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-3A0A0B4J1K1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Trav4-3A0A0B4J1K1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav4-3A0A0B4J1K1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav4-3A0A0B4J1K1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-3A0A0B4J1K1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-3A0A0B4J1K1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-3A0A0B4J1K1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-3A0A0B4J1K1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-3A0A0B4J1K1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-3A0A0B4J1K1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-3A0A0B4J1K1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-3A0A0B4J1K1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-3A0A0B4J1K1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-3A0A0B4J1K1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-3A0A0B4J1K1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-3A0A0B4J1K1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-3A0A0B4J1K1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
Trav4-3A0A0B4J1K1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-3A0A0B4J1K1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-3A0A0B4J1K1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav4-3A0A0B4J1K1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-3A0A0B4J1K1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav4-3A0A0B4J1K1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-3A0A0B4J1K1 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.51■□□□□ 0.07
Trav4-3A0A0B4J1K1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav4-3A0A0B4J1K1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-3A0A0B4J1K1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-3A0A0B4J1K1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-3A0A0B4J1K1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav4-3A0A0B4J1K1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-3A0A0B4J1K1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-3A0A0B4J1K1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav4-3A0A0B4J1K1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-3A0A0B4J1K1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav4-3A0A0B4J1K1 Gm26115-201ENSMUST00000175605 87 ntBASIC15.49■□□□□ 0.07
Trav4-3A0A0B4J1K1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav4-3A0A0B4J1K1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-3A0A0B4J1K1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-3A0A0B4J1K1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-3A0A0B4J1K1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-3A0A0B4J1K1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-3A0A0B4J1K1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav4-3A0A0B4J1K1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-3A0A0B4J1K1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-3A0A0B4J1K1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-3A0A0B4J1K1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-3A0A0B4J1K1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-3A0A0B4J1K1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-3A0A0B4J1K1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-3A0A0B4J1K1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-3A0A0B4J1K1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-3A0A0B4J1K1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav4-3A0A0B4J1K1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-3A0A0B4J1K1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.46■□□□□ 0.06
Trav4-3A0A0B4J1K1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-3A0A0B4J1K1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav4-3A0A0B4J1K1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-3A0A0B4J1K1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-3A0A0B4J1K1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-3A0A0B4J1K1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-3A0A0B4J1K1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-3A0A0B4J1K1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-3A0A0B4J1K1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav4-3A0A0B4J1K1 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.43■□□□□ 0.06
Trav4-3A0A0B4J1K1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-3A0A0B4J1K1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-3A0A0B4J1K1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-3A0A0B4J1K1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-3A0A0B4J1K1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-3A0A0B4J1K1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav4-3A0A0B4J1K1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav4-3A0A0B4J1K1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav4-3A0A0B4J1K1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-3A0A0B4J1K1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-3A0A0B4J1K1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-3A0A0B4J1K1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-3A0A0B4J1K1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav4-3A0A0B4J1K1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-3A0A0B4J1K1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-3A0A0B4J1K1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-3A0A0B4J1K1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav4-3A0A0B4J1K1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms