Protein–RNA interactions for Protein: A0A0A6YW38

Gm28870, Predicted gene 28870, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28870A0A0A6YW38 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28870A0A0A6YW38 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Gm28870A0A0A6YW38 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28870A0A0A6YW38 Particl-201ENSMUST00000205370 1560 ntBASIC19.54■□□□□ 0.72
Gm28870A0A0A6YW38 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28870A0A0A6YW38 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Gm28870A0A0A6YW38 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28870A0A0A6YW38 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28870A0A0A6YW38 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28870A0A0A6YW38 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Gm28870A0A0A6YW38 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28870A0A0A6YW38 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Gm28870A0A0A6YW38 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Gm28870A0A0A6YW38 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm28870A0A0A6YW38 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.52■□□□□ 0.72
Gm28870A0A0A6YW38 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.52■□□□□ 0.72
Gm28870A0A0A6YW38 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm28870A0A0A6YW38 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28870A0A0A6YW38 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Gm28870A0A0A6YW38 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Gm28870A0A0A6YW38 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28870A0A0A6YW38 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28870A0A0A6YW38 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.49■□□□□ 0.71
Gm28870A0A0A6YW38 Gm30023-201ENSMUST00000197970 889 ntBASIC19.49■□□□□ 0.71
Gm28870A0A0A6YW38 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28870A0A0A6YW38 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28870A0A0A6YW38 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28870A0A0A6YW38 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28870A0A0A6YW38 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28870A0A0A6YW38 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28870A0A0A6YW38 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28870A0A0A6YW38 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28870A0A0A6YW38 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gm28870A0A0A6YW38 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28870A0A0A6YW38 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28870A0A0A6YW38 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28870A0A0A6YW38 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28870A0A0A6YW38 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28870A0A0A6YW38 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Gm28870A0A0A6YW38 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28870A0A0A6YW38 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28870A0A0A6YW38 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28870A0A0A6YW38 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28870A0A0A6YW38 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.47■□□□□ 0.71
Gm28870A0A0A6YW38 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28870A0A0A6YW38 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28870A0A0A6YW38 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28870A0A0A6YW38 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Gm28870A0A0A6YW38 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28870A0A0A6YW38 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Gm28870A0A0A6YW38 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28870A0A0A6YW38 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28870A0A0A6YW38 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28870A0A0A6YW38 Gm45855-201ENSMUST00000212546 880 ntBASIC19.45■□□□□ 0.7
Gm28870A0A0A6YW38 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28870A0A0A6YW38 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28870A0A0A6YW38 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28870A0A0A6YW38 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28870A0A0A6YW38 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm28870A0A0A6YW38 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28870A0A0A6YW38 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28870A0A0A6YW38 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28870A0A0A6YW38 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28870A0A0A6YW38 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28870A0A0A6YW38 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28870A0A0A6YW38 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28870A0A0A6YW38 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28870A0A0A6YW38 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28870A0A0A6YW38 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28870A0A0A6YW38 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28870A0A0A6YW38 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.42■□□□□ 0.7
Gm28870A0A0A6YW38 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Gm28870A0A0A6YW38 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.42■□□□□ 0.7
Gm28870A0A0A6YW38 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28870A0A0A6YW38 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Gm28870A0A0A6YW38 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28870A0A0A6YW38 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28870A0A0A6YW38 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28870A0A0A6YW38 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28870A0A0A6YW38 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28870A0A0A6YW38 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28870A0A0A6YW38 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gm28870A0A0A6YW38 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28870A0A0A6YW38 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gm28870A0A0A6YW38 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm28870A0A0A6YW38 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28870A0A0A6YW38 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28870A0A0A6YW38 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28870A0A0A6YW38 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.38■□□□□ 0.69
Gm28870A0A0A6YW38 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm28870A0A0A6YW38 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28870A0A0A6YW38 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28870A0A0A6YW38 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28870A0A0A6YW38 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28870A0A0A6YW38 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28870A0A0A6YW38 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28870A0A0A6YW38 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28870A0A0A6YW38 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gm28870A0A0A6YW38 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28870A0A0A6YW38 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms