Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.86■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.86■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ighv1-23A0A0A6YVW3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ighv1-23A0A0A6YVW3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-23A0A0A6YVW3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ighv1-23A0A0A6YVW3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-23A0A0A6YVW3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.82■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.82■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-23A0A0A6YVW3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.8■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-23A0A0A6YVW3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-23A0A0A6YVW3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.77■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv1-23A0A0A6YVW3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-23A0A0A6YVW3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.76■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Ighv1-23A0A0A6YVW3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.72■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-23A0A0A6YVW3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms