Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav9d-3A0A075B695 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.1■□□□□ 0.17
Trav9d-3A0A075B695 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-3A0A075B695 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-3A0A075B695 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-3A0A075B695 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-3A0A075B695 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-3A0A075B695 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9d-3A0A075B695 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-3A0A075B695 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-3A0A075B695 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-3A0A075B695 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-3A0A075B695 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-3A0A075B695 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav9d-3A0A075B695 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav9d-3A0A075B695 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9d-3A0A075B695 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trav9d-3A0A075B695 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9d-3A0A075B695 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9d-3A0A075B695 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9d-3A0A075B695 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9d-3A0A075B695 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9d-3A0A075B695 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
Trav9d-3A0A075B695 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9d-3A0A075B695 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9d-3A0A075B695 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9d-3A0A075B695 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9d-3A0A075B695 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-3A0A075B695 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-3A0A075B695 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9d-3A0A075B695 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav9d-3A0A075B695 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav9d-3A0A075B695 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Trav9d-3A0A075B695 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-3A0A075B695 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9d-3A0A075B695 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav9d-3A0A075B695 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav9d-3A0A075B695 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-3A0A075B695 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-3A0A075B695 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-3A0A075B695 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav9d-3A0A075B695 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav9d-3A0A075B695 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-3A0A075B695 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9d-3A0A075B695 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9d-3A0A075B695 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9d-3A0A075B695 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9d-3A0A075B695 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9d-3A0A075B695 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav9d-3A0A075B695 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav9d-3A0A075B695 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.02■□□□□ 0.15
Trav9d-3A0A075B695 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9d-3A0A075B695 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9d-3A0A075B695 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Trav9d-3A0A075B695 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav9d-3A0A075B695 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav9d-3A0A075B695 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav9d-3A0A075B695 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-3A0A075B695 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16■□□□□ 0.15
Trav9d-3A0A075B695 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-3A0A075B695 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-3A0A075B695 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-3A0A075B695 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-3A0A075B695 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-3A0A075B695 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav9d-3A0A075B695 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-3A0A075B695 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav9d-3A0A075B695 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-3A0A075B695 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-3A0A075B695 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trav9d-3A0A075B695 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-3A0A075B695 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-3A0A075B695 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav9d-3A0A075B695 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-3A0A075B695 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Trav9d-3A0A075B695 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-3A0A075B695 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-3A0A075B695 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-3A0A075B695 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-3A0A075B695 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.97■□□□□ 0.15
Trav9d-3A0A075B695 Gm7432-201ENSMUST00000210343 879 ntBASIC15.97■□□□□ 0.15
Trav9d-3A0A075B695 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-3A0A075B695 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-3A0A075B695 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-3A0A075B695 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-3A0A075B695 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-3A0A075B695 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms