Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav18A0A075B656 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.54■□□□□ 0.56
Trav18A0A075B656 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav18A0A075B656 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.54■□□□□ 0.56
Trav18A0A075B656 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav18A0A075B656 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav18A0A075B656 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav18A0A075B656 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Trav18A0A075B656 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trav18A0A075B656 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav18A0A075B656 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.53■□□□□ 0.56
Trav18A0A075B656 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav18A0A075B656 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.53■□□□□ 0.56
Trav18A0A075B656 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav18A0A075B656 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trav18A0A075B656 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav18A0A075B656 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.52■□□□□ 0.56
Trav18A0A075B656 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav18A0A075B656 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav18A0A075B656 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav18A0A075B656 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav18A0A075B656 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.51■□□□□ 0.55
Trav18A0A075B656 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav18A0A075B656 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav18A0A075B656 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav18A0A075B656 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav18A0A075B656 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav18A0A075B656 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav18A0A075B656 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav18A0A075B656 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav18A0A075B656 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trav18A0A075B656 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav18A0A075B656 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.49■□□□□ 0.55
Trav18A0A075B656 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav18A0A075B656 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav18A0A075B656 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav18A0A075B656 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav18A0A075B656 Gm6821-201ENSMUST00000107540 542 ntBASIC18.49■□□□□ 0.55
Trav18A0A075B656 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav18A0A075B656 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav18A0A075B656 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav18A0A075B656 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav18A0A075B656 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav18A0A075B656 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav18A0A075B656 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav18A0A075B656 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav18A0A075B656 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav18A0A075B656 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trav18A0A075B656 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.46■□□□□ 0.55
Trav18A0A075B656 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav18A0A075B656 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav18A0A075B656 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav18A0A075B656 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav18A0A075B656 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trav18A0A075B656 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav18A0A075B656 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav18A0A075B656 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav18A0A075B656 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav18A0A075B656 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav18A0A075B656 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav18A0A075B656 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav18A0A075B656 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav18A0A075B656 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav18A0A075B656 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav18A0A075B656 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav18A0A075B656 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav18A0A075B656 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav18A0A075B656 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav18A0A075B656 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Trav18A0A075B656 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav18A0A075B656 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav18A0A075B656 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trav18A0A075B656 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav18A0A075B656 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav18A0A075B656 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trav18A0A075B656 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav18A0A075B656 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav18A0A075B656 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav18A0A075B656 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav18A0A075B656 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav18A0A075B656 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav18A0A075B656 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.39■□□□□ 0.53
Trav18A0A075B656 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav18A0A075B656 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav18A0A075B656 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav18A0A075B656 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav18A0A075B656 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav18A0A075B656 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav18A0A075B656 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Trav18A0A075B656 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.38■□□□□ 0.53
Trav18A0A075B656 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav18A0A075B656 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trav18A0A075B656 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav18A0A075B656 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trav18A0A075B656 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav18A0A075B656 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav18A0A075B656 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Trav18A0A075B656 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav18A0A075B656 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav18A0A075B656 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms