Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav4-4-dv10A0A075B651 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav4-4-dv10A0A075B651 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4-4-dv10A0A075B651 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4-4-dv10A0A075B651 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4-4-dv10A0A075B651 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav4-4-dv10A0A075B651 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav4-4-dv10A0A075B651 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav4-4-dv10A0A075B651 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav4-4-dv10A0A075B651 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav4-4-dv10A0A075B651 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav4-4-dv10A0A075B651 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav4-4-dv10A0A075B651 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav4-4-dv10A0A075B651 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav4-4-dv10A0A075B651 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav4-4-dv10A0A075B651 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav4-4-dv10A0A075B651 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav4-4-dv10A0A075B651 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav4-4-dv10A0A075B651 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav4-4-dv10A0A075B651 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav4-4-dv10A0A075B651 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trav4-4-dv10A0A075B651 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav4-4-dv10A0A075B651 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trav4-4-dv10A0A075B651 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Trav4-4-dv10A0A075B651 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav4-4-dv10A0A075B651 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav4-4-dv10A0A075B651 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav4-4-dv10A0A075B651 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav4-4-dv10A0A075B651 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trav4-4-dv10A0A075B651 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav4-4-dv10A0A075B651 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav4-4-dv10A0A075B651 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-4-dv10A0A075B651 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-4-dv10A0A075B651 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Gm37136-201ENSMUST00000194368 194 ntBASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-4-dv10A0A075B651 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-4-dv10A0A075B651 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms