Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15d-1-dv6d-1A0A075B624 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.2■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.19■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.17■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.15■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.14■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.14■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav15d-1-dv6d-1A0A075B624 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.14■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.12■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms