Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7n-5A0A075B604 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7n-5A0A075B604 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7n-5A0A075B604 Gm11687-201ENSMUST00000118911 886 ntBASIC18.65■□□□□ 0.58
Trav7n-5A0A075B604 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7n-5A0A075B604 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav7n-5A0A075B604 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trav7n-5A0A075B604 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7n-5A0A075B604 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trav7n-5A0A075B604 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.63■□□□□ 0.57
Trav7n-5A0A075B604 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Trav7n-5A0A075B604 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7n-5A0A075B604 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trav7n-5A0A075B604 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7n-5A0A075B604 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.63■□□□□ 0.57
Trav7n-5A0A075B604 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trav7n-5A0A075B604 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7n-5A0A075B604 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7n-5A0A075B604 Mir6538-201ENSMUST00000183713 110 ntBASIC18.61■□□□□ 0.57
Trav7n-5A0A075B604 Gm16437-201ENSMUST00000025669 507 ntBASIC18.61■□□□□ 0.57
Trav7n-5A0A075B604 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7n-5A0A075B604 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7n-5A0A075B604 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7n-5A0A075B604 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7n-5A0A075B604 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7n-5A0A075B604 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7n-5A0A075B604 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7n-5A0A075B604 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7n-5A0A075B604 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7n-5A0A075B604 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.59■□□□□ 0.57
Trav7n-5A0A075B604 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7n-5A0A075B604 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trav7n-5A0A075B604 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav7n-5A0A075B604 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Trav7n-5A0A075B604 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Trav7n-5A0A075B604 Gm11175-201ENSMUST00000116172 543 ntBASIC18.58■□□□□ 0.56
Trav7n-5A0A075B604 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav7n-5A0A075B604 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav7n-5A0A075B604 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav7n-5A0A075B604 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.57■□□□□ 0.56
Trav7n-5A0A075B604 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav7n-5A0A075B604 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav7n-5A0A075B604 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trav7n-5A0A075B604 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trav7n-5A0A075B604 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7n-5A0A075B604 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7n-5A0A075B604 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7n-5A0A075B604 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7n-5A0A075B604 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7n-5A0A075B604 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7n-5A0A075B604 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7n-5A0A075B604 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7n-5A0A075B604 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7n-5A0A075B604 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.55■□□□□ 0.56
Trav7n-5A0A075B604 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7n-5A0A075B604 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trav7n-5A0A075B604 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7n-5A0A075B604 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trav7n-5A0A075B604 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7n-5A0A075B604 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7n-5A0A075B604 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7n-5A0A075B604 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7n-5A0A075B604 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7n-5A0A075B604 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.53■□□□□ 0.56
Trav7n-5A0A075B604 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7n-5A0A075B604 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav7n-5A0A075B604 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav7n-5A0A075B604 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trav7n-5A0A075B604 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.52■□□□□ 0.56
Trav7n-5A0A075B604 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.52■□□□□ 0.55
Trav7n-5A0A075B604 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Trav7n-5A0A075B604 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.51■□□□□ 0.55
Trav7n-5A0A075B604 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7n-5A0A075B604 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7n-5A0A075B604 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7n-5A0A075B604 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.5■□□□□ 0.55
Trav7n-5A0A075B604 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7n-5A0A075B604 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7n-5A0A075B604 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7n-5A0A075B604 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav7n-5A0A075B604 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Trav7n-5A0A075B604 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7n-5A0A075B604 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7n-5A0A075B604 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7n-5A0A075B604 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav7n-5A0A075B604 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.48■□□□□ 0.55
Trav7n-5A0A075B604 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms