Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 AL441883.1-201ENST00000566170 1045 ntBASIC12.85□□□□□ -0.35
UPK3BQ9BT76 AC087388.1-201ENST00000571370 1112 ntBASIC12.85□□□□□ -0.35
UPK3BQ9BT76 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UPK3BQ9BT76 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 STARP1-201ENST00000397973 869 ntBASIC12.84□□□□□ -0.35
UPK3BQ9BT76 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.84□□□□□ -0.35
UPK3BQ9BT76 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 AC034232.1-201ENST00000506026 1064 ntBASIC12.84□□□□□ -0.35
UPK3BQ9BT76 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.84□□□□□ -0.35
UPK3BQ9BT76 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 FER1L4-210ENST00000615531 5998 ntBASIC12.84□□□□□ -0.35
UPK3BQ9BT76 KRT8P32-201ENST00000512863 1461 ntBASIC12.84□□□□□ -0.35
UPK3BQ9BT76 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 AP000974.1-201ENST00000623909 2387 ntBASIC12.84□□□□□ -0.35
UPK3BQ9BT76 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
UPK3BQ9BT76 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
UPK3BQ9BT76 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
UPK3BQ9BT76 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UPK3BQ9BT76 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 AC036111.1-201ENST00000533973 1582 ntBASIC12.83□□□□□ -0.36
UPK3BQ9BT76 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms