Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.28■□□□□ 0.84
NME8Q8N427 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME8Q8N427 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME8Q8N427 TOB2P1-201ENST00000469761 992 ntBASIC20.28■□□□□ 0.84
NME8Q8N427 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.28■□□□□ 0.84
NME8Q8N427 RN7SL510P-201ENST00000581311 263 ntBASIC20.28■□□□□ 0.84
NME8Q8N427 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NME8Q8N427 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.28■□□□□ 0.84
NME8Q8N427 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NME8Q8N427 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME8Q8N427 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME8Q8N427 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME8Q8N427 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NME8Q8N427 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME8Q8N427 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME8Q8N427 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.27■□□□□ 0.84
NME8Q8N427 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.27■□□□□ 0.84
NME8Q8N427 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NME8Q8N427 AL161938.1-201ENST00000569833 2180 ntBASIC20.27■□□□□ 0.84
NME8Q8N427 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
NME8Q8N427 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME8Q8N427 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.27■□□□□ 0.84
NME8Q8N427 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME8Q8N427 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.27■□□□□ 0.84
NME8Q8N427 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME8Q8N427 TSPY19P-201ENST00000418461 509 ntBASIC20.27■□□□□ 0.84
NME8Q8N427 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.27■□□□□ 0.84
NME8Q8N427 TSPY18P-201ENST00000441642 509 ntBASIC20.27■□□□□ 0.84
NME8Q8N427 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NME8Q8N427 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.27■□□□□ 0.84
NME8Q8N427 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.27■□□□□ 0.84
NME8Q8N427 AL121772.3-201ENST00000610840 674 ntBASIC20.27■□□□□ 0.84
NME8Q8N427 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.27■□□□□ 0.84
NME8Q8N427 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME8Q8N427 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NME8Q8N427 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NME8Q8N427 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.27■□□□□ 0.83
NME8Q8N427 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NME8Q8N427 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.27■□□□□ 0.83
NME8Q8N427 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NME8Q8N427 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
NME8Q8N427 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME8Q8N427 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.26■□□□□ 0.83
NME8Q8N427 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME8Q8N427 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME8Q8N427 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME8Q8N427 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NME8Q8N427 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NME8Q8N427 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME8Q8N427 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.26■□□□□ 0.83
NME8Q8N427 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME8Q8N427 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.26■□□□□ 0.83
NME8Q8N427 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
NME8Q8N427 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME8Q8N427 AC004870.1-201ENST00000315132 882 ntBASIC20.26■□□□□ 0.83
NME8Q8N427 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME8Q8N427 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.26■□□□□ 0.83
NME8Q8N427 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.26■□□□□ 0.83
NME8Q8N427 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.26■□□□□ 0.83
NME8Q8N427 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME8Q8N427 RN7SL606P-201ENST00000472779 293 ntBASIC20.26■□□□□ 0.83
NME8Q8N427 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.26■□□□□ 0.83
NME8Q8N427 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.26■□□□□ 0.83
NME8Q8N427 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.26■□□□□ 0.83
NME8Q8N427 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.26■□□□□ 0.83
NME8Q8N427 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME8Q8N427 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.26■□□□□ 0.83
NME8Q8N427 AL020996.1-203ENST00000536896 2307 ntBASIC20.26■□□□□ 0.83
NME8Q8N427 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME8Q8N427 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.26■□□□□ 0.83
NME8Q8N427 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NME8Q8N427 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NME8Q8N427 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.25■□□□□ 0.83
NME8Q8N427 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.25■□□□□ 0.83
NME8Q8N427 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.25■□□□□ 0.83
NME8Q8N427 AL353692.3-201ENST00000407031 1396 ntBASIC20.25■□□□□ 0.83
NME8Q8N427 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NME8Q8N427 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.25■□□□□ 0.83
NME8Q8N427 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 FAAHP1-202ENST00000446499 1238 ntBASIC20.25■□□□□ 0.83
NME8Q8N427 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.25■□□□□ 0.83
NME8Q8N427 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NME8Q8N427 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NME8Q8N427 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NME8Q8N427 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.25■□□□□ 0.83
NME8Q8N427 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NME8Q8N427 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NME8Q8N427 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.25■□□□□ 0.83
NME8Q8N427 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms