Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Prpf31Q8CCF0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17■□□□□ 0.31
Prpf31Q8CCF0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Gm4899-201ENSMUST00000178708 719 ntBASIC17■□□□□ 0.31
Prpf31Q8CCF0 Gm5253-201ENSMUST00000187104 1025 ntBASIC17■□□□□ 0.31
Prpf31Q8CCF0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf31Q8CCF0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Gm12260-201ENSMUST00000122447 411 ntBASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Gm9727-201ENSMUST00000161387 555 ntBASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Gm5264-201ENSMUST00000190584 848 ntBASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Prpf31Q8CCF0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Gm15467-201ENSMUST00000120582 445 ntBASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Gm18489-201ENSMUST00000172565 551 ntBASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf31Q8CCF0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf31Q8CCF0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf31Q8CCF0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms