Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd4Q8CC84 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Mir5130-201ENSMUST00000175160 84 ntBASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lysmd4Q8CC84 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lysmd4Q8CC84 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lysmd4Q8CC84 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lysmd4Q8CC84 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lysmd4Q8CC84 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lysmd4Q8CC84 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Lysmd4Q8CC84 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lysmd4Q8CC84 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lysmd4Q8CC84 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lysmd4Q8CC84 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lysmd4Q8CC84 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Gm13559-201ENSMUST00000120476 863 ntBASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Gm18959-201ENSMUST00000208954 655 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms