Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC068880.1-201ENST00000507289 2297 ntBASIC17.08■□□□□ 0.32
VRK2Q86Y07 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.08■□□□□ 0.32
VRK2Q86Y07 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
VRK2Q86Y07 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VRK2Q86Y07 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 AP000593.1-201ENST00000393668 712 ntBASIC17.07■□□□□ 0.32
VRK2Q86Y07 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 MIR4785-201ENST00000585005 73 ntBASIC17.07■□□□□ 0.32
VRK2Q86Y07 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK2Q86Y07 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.07■□□□□ 0.32
VRK2Q86Y07 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.06■□□□□ 0.32
VRK2Q86Y07 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 SNORA78-201ENST00000459373 127 ntBASIC17.06■□□□□ 0.32
VRK2Q86Y07 AP003041.3-201ENST00000527151 707 ntBASIC17.06■□□□□ 0.32
VRK2Q86Y07 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 AL023803.3-201ENST00000615559 522 ntBASIC17.06■□□□□ 0.32
VRK2Q86Y07 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.06■□□□□ 0.32
VRK2Q86Y07 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK2Q86Y07 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.05■□□□□ 0.32
VRK2Q86Y07 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK2Q86Y07 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK2Q86Y07 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK2Q86Y07 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK2Q86Y07 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VRK2Q86Y07 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK2Q86Y07 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK2Q86Y07 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VRK2Q86Y07 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK2Q86Y07 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK2Q86Y07 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK2Q86Y07 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.05■□□□□ 0.32
VRK2Q86Y07 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VRK2Q86Y07 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VRK2Q86Y07 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms