Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 PC-214ENST00000628663 1470 ntTSL 5 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 KRT19P2-202ENST00000557173 1012 ntBASIC10.03□□□□□ -0.8
UBR4Q5T4S7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 U62317.3-201ENST00000608319 855 ntBASIC10.03□□□□□ -0.8
UBR4Q5T4S7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 FAM58DP-201ENST00000428076 619 ntBASIC10.03□□□□□ -0.8
UBR4Q5T4S7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC10.03□□□□□ -0.8
UBR4Q5T4S7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
UBR4Q5T4S7 SMG8-203ENST00000578922 2178 ntBASIC10.02□□□□□ -0.8
UBR4Q5T4S7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
UBR4Q5T4S7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC10.02□□□□□ -0.8
UBR4Q5T4S7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
UBR4Q5T4S7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.02□□□□□ -0.8
UBR4Q5T4S7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
UBR4Q5T4S7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC10.02□□□□□ -0.8
UBR4Q5T4S7 AL162274.1-201ENST00000617191 1098 ntBASIC10.02□□□□□ -0.8
UBR4Q5T4S7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 AL121761.2-201ENST00000598007 1648 ntBASIC10.02□□□□□ -0.81
UBR4Q5T4S7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 KLF2P3-201ENST00000451977 1087 ntBASIC10.02□□□□□ -0.81
UBR4Q5T4S7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 HOXB1-202ENST00000577092 1414 ntBASIC10.02□□□□□ -0.81
UBR4Q5T4S7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 AC099343.3-201ENST00000605834 2503 ntBASIC10.02□□□□□ -0.81
UBR4Q5T4S7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 IGLL3P-201ENST00000412472 434 ntBASIC10.02□□□□□ -0.81
UBR4Q5T4S7 NME1-207ENST00000480143 964 ntTSL 2 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
UBR4Q5T4S7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 AC119751.2-201ENST00000504529 210 ntBASIC10.01□□□□□ -0.81
UBR4Q5T4S7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 AC113404.2-201ENST00000507884 177 ntBASIC10.01□□□□□ -0.81
UBR4Q5T4S7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 AL512356.2-201ENST00000546955 174 ntBASIC10.01□□□□□ -0.81
UBR4Q5T4S7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
UBR4Q5T4S7 AC112492.5-201ENST00000421897 457 ntBASIC10.01□□□□□ -0.81
UBR4Q5T4S7 KRT17P8-201ENST00000540749 863 ntBASIC10.01□□□□□ -0.81
UBR4Q5T4S7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms