Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PRIM1P49642 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PRIM1P49642 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.93■■□□□ 1.42
PRIM1P49642 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PRIM1P49642 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.93■■□□□ 1.42
PRIM1P49642 RCN1P2-201ENST00000398357 915 ntBASIC23.93■■□□□ 1.42
PRIM1P49642 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC23.93■■□□□ 1.42
PRIM1P49642 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC23.93■■□□□ 1.42
PRIM1P49642 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.93■■□□□ 1.42
PRIM1P49642 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.93■■□□□ 1.42
PRIM1P49642 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.93■■□□□ 1.42
PRIM1P49642 AC073648.2-201ENST00000510116 352 ntBASIC23.93■■□□□ 1.42
PRIM1P49642 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.93■■□□□ 1.42
PRIM1P49642 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.93■■□□□ 1.42
PRIM1P49642 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PRIM1P49642 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.93■■□□□ 1.42
PRIM1P49642 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PRIM1P49642 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
PRIM1P49642 AL357033.4-201ENST00000617703 1807 ntBASIC23.93■■□□□ 1.42
PRIM1P49642 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
PRIM1P49642 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PRIM1P49642 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PRIM1P49642 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.92■■□□□ 1.42
PRIM1P49642 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.92■■□□□ 1.42
PRIM1P49642 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC23.92■■□□□ 1.42
PRIM1P49642 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.92■■□□□ 1.42
PRIM1P49642 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM1P49642 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM1P49642 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM1P49642 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
PRIM1P49642 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM1P49642 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PRIM1P49642 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.92■■□□□ 1.42
PRIM1P49642 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.92■■□□□ 1.42
PRIM1P49642 BX842568.4-201ENST00000421222 227 ntBASIC23.92■■□□□ 1.42
PRIM1P49642 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.92■■□□□ 1.42
PRIM1P49642 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC23.92■■□□□ 1.42
PRIM1P49642 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.92■■□□□ 1.42
PRIM1P49642 AL355877.3-201ENST00000622820 899 ntBASIC23.92■■□□□ 1.42
PRIM1P49642 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM1P49642 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM1P49642 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM1P49642 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM1P49642 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.92■■□□□ 1.42
PRIM1P49642 KRT8P50-201ENST00000562022 1438 ntBASIC23.92■■□□□ 1.42
PRIM1P49642 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.92■■□□□ 1.42
PRIM1P49642 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM1P49642 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM1P49642 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM1P49642 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM1P49642 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC23.91■■□□□ 1.42
PRIM1P49642 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.91■■□□□ 1.42
PRIM1P49642 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.91■■□□□ 1.42
PRIM1P49642 AC116407.3-201ENST00000623905 1129 ntBASIC23.91■■□□□ 1.42
PRIM1P49642 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM1P49642 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM1P49642 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM1P49642 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM1P49642 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM1P49642 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM1P49642 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM1P49642 Z98044.1-201ENST00000632503 1764 ntBASIC23.91■■□□□ 1.42
PRIM1P49642 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.9■■□□□ 1.42
PRIM1P49642 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM1P49642 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM1P49642 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.9■■□□□ 1.42
PRIM1P49642 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM1P49642 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM1P49642 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM1P49642 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.9■■□□□ 1.42
PRIM1P49642 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM1P49642 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM1P49642 FGFR3P6-201ENST00000457012 610 ntBASIC23.9■■□□□ 1.42
PRIM1P49642 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.9■■□□□ 1.42
PRIM1P49642 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM1P49642 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.9■■□□□ 1.42
PRIM1P49642 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.9■■□□□ 1.42
PRIM1P49642 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM1P49642 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.9■■□□□ 1.42
PRIM1P49642 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
PRIM1P49642 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM1P49642 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM1P49642 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.89■■□□□ 1.42
PRIM1P49642 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.89■■□□□ 1.42
PRIM1P49642 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.89■■□□□ 1.42
PRIM1P49642 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.89■■□□□ 1.42
PRIM1P49642 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
PRIM1P49642 FAM220CP-201ENST00000395253 831 ntBASIC23.89■■□□□ 1.41
PRIM1P49642 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.89■■□□□ 1.41
PRIM1P49642 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PRIM1P49642 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23.89■■□□□ 1.41
PRIM1P49642 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.89■■□□□ 1.41
PRIM1P49642 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC23.89■■□□□ 1.41
PRIM1P49642 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.89■■□□□ 1.41
PRIM1P49642 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.89■■□□□ 1.41
PRIM1P49642 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC23.89■■□□□ 1.41
PRIM1P49642 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PRIM1P49642 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PRIM1P49642 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PRIM1P49642 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms