Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RORAP35398 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.52■□□□□ 0.39
RORAP35398 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RORAP35398 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RORAP35398 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RORAP35398 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
RORAP35398 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RORAP35398 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.51■□□□□ 0.39
RORAP35398 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.51■□□□□ 0.39
RORAP35398 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.51■□□□□ 0.39
RORAP35398 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RORAP35398 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
RORAP35398 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.51■□□□□ 0.39
RORAP35398 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 KRT8P26-201ENST00000534154 1276 ntBASIC17.51■□□□□ 0.39
RORAP35398 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
RORAP35398 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 AC092119.3-201ENST00000612618 583 ntBASIC17.51■□□□□ 0.39
RORAP35398 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.51■□□□□ 0.39
RORAP35398 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RORAP35398 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.51■□□□□ 0.39
RORAP35398 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RORAP35398 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RORAP35398 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.51■□□□□ 0.39
RORAP35398 Z98044.1-201ENST00000632503 1764 ntBASIC17.51■□□□□ 0.39
RORAP35398 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.5■□□□□ 0.39
RORAP35398 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RORAP35398 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.5■□□□□ 0.39
RORAP35398 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RORAP35398 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RORAP35398 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.5■□□□□ 0.39
RORAP35398 AP002383.4-201ENST00000442518 975 ntBASIC17.5■□□□□ 0.39
RORAP35398 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
RORAP35398 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.5■□□□□ 0.39
RORAP35398 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.5■□□□□ 0.39
RORAP35398 MIR3180-1-201ENST00000580374 94 ntBASIC17.5■□□□□ 0.39
RORAP35398 MIR3180-3-201ENST00000584616 94 ntBASIC17.5■□□□□ 0.39
RORAP35398 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.5■□□□□ 0.39
RORAP35398 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.5■□□□□ 0.39
RORAP35398 MTMR9LP-203ENST00000426597 1545 ntBASIC17.5■□□□□ 0.39
RORAP35398 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.5■□□□□ 0.39
RORAP35398 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RORAP35398 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RORAP35398 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.5■□□□□ 0.39
RORAP35398 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.49■□□□□ 0.39
RORAP35398 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RORAP35398 AL357033.4-201ENST00000617703 1807 ntBASIC17.49■□□□□ 0.39
RORAP35398 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RORAP35398 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.49■□□□□ 0.39
RORAP35398 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RORAP35398 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RORAP35398 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.49■□□□□ 0.39
RORAP35398 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.49■□□□□ 0.39
RORAP35398 KRT18P41-201ENST00000518924 1277 ntBASIC17.49■□□□□ 0.39
RORAP35398 RNF126P1-202ENST00000569893 925 ntBASIC17.49■□□□□ 0.39
RORAP35398 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RORAP35398 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
RORAP35398 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.49■□□□□ 0.39
RORAP35398 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms