Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.36■□□□□ 0.85
CD4P01730 MIR5100-201ENST00000579544 119 ntBASIC20.36■□□□□ 0.85
CD4P01730 AC148477.8-201ENST00000624298 468 ntBASIC20.36■□□□□ 0.85
CD4P01730 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CD4P01730 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD4P01730 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CD4P01730 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD4P01730 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CD4P01730 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD4P01730 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD4P01730 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CD4P01730 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD4P01730 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD4P01730 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CD4P01730 AC007952.6-201ENST00000573168 2673 ntBASIC20.35■□□□□ 0.85
CD4P01730 AC003957.1-201ENST00000625108 2673 ntBASIC20.35■□□□□ 0.85
CD4P01730 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CD4P01730 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.35■□□□□ 0.85
CD4P01730 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD4P01730 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.35■□□□□ 0.85
CD4P01730 AL591684.3-201ENST00000605187 298 ntBASIC20.35■□□□□ 0.85
CD4P01730 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.35■□□□□ 0.85
CD4P01730 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD4P01730 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.35■□□□□ 0.85
CD4P01730 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD4P01730 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD4P01730 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.35■□□□□ 0.85
CD4P01730 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD4P01730 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
CD4P01730 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD4P01730 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD4P01730 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CD4P01730 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.34■□□□□ 0.85
CD4P01730 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.34■□□□□ 0.85
CD4P01730 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.34■□□□□ 0.85
CD4P01730 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.34■□□□□ 0.85
CD4P01730 KRT18P58-201ENST00000527480 1120 ntBASIC20.34■□□□□ 0.85
CD4P01730 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.34■□□□□ 0.85
CD4P01730 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.34■□□□□ 0.85
CD4P01730 AC009065.1-201ENST00000564055 1225 ntBASIC20.34■□□□□ 0.85
CD4P01730 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CD4P01730 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.34■□□□□ 0.85
CD4P01730 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.34■□□□□ 0.85
CD4P01730 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.34■□□□□ 0.85
CD4P01730 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.34■□□□□ 0.85
CD4P01730 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.34■□□□□ 0.85
CD4P01730 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD4P01730 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.34■□□□□ 0.85
CD4P01730 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.33■□□□□ 0.85
CD4P01730 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CD4P01730 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD4P01730 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD4P01730 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD4P01730 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD4P01730 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD4P01730 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD4P01730 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.33■□□□□ 0.85
CD4P01730 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.33■□□□□ 0.85
CD4P01730 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CD4P01730 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.33■□□□□ 0.85
CD4P01730 AC106730.1-201ENST00000566722 1090 ntBASIC20.33■□□□□ 0.85
CD4P01730 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.33■□□□□ 0.85
CD4P01730 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.33■□□□□ 0.85
CD4P01730 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.33■□□□□ 0.85
CD4P01730 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.33■□□□□ 0.85
CD4P01730 AC068587.9-201ENST00000641814 219 ntBASIC20.33■□□□□ 0.85
CD4P01730 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CD4P01730 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD4P01730 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD4P01730 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD4P01730 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD4P01730 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.33■□□□□ 0.84
CD4P01730 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD4P01730 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CD4P01730 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.32■□□□□ 0.84
CD4P01730 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.32■□□□□ 0.84
CD4P01730 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CD4P01730 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 AF186996.4-201ENST00000467186 377 ntBASIC20.32■□□□□ 0.84
CD4P01730 RNPS1P1-201ENST00000507437 918 ntBASIC20.32■□□□□ 0.84
CD4P01730 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms