Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IsxA1A546 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
IsxA1A546 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.52□□□□□ -0.09
IsxA1A546 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IsxA1A546 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IsxA1A546 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IsxA1A546 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IsxA1A546 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
IsxA1A546 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
IsxA1A546 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.51□□□□□ -0.09
IsxA1A546 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.51□□□□□ -0.09
IsxA1A546 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.51□□□□□ -0.09
IsxA1A546 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.51□□□□□ -0.09
IsxA1A546 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Il3ra-202ENSMUST00000223589 738 ntBASIC14.51□□□□□ -0.09
IsxA1A546 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
IsxA1A546 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.51□□□□□ -0.09
IsxA1A546 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
IsxA1A546 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IsxA1A546 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.5□□□□□ -0.09
IsxA1A546 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.5□□□□□ -0.09
IsxA1A546 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.5□□□□□ -0.09
IsxA1A546 Gm13836-201ENSMUST00000121159 501 ntBASIC14.5□□□□□ -0.09
IsxA1A546 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.5□□□□□ -0.09
IsxA1A546 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
IsxA1A546 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.5□□□□□ -0.09
IsxA1A546 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.5□□□□□ -0.09
IsxA1A546 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
IsxA1A546 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
IsxA1A546 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IsxA1A546 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IsxA1A546 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
IsxA1A546 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IsxA1A546 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
IsxA1A546 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
IsxA1A546 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
IsxA1A546 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
IsxA1A546 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.49□□□□□ -0.09
IsxA1A546 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.49□□□□□ -0.09
IsxA1A546 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
IsxA1A546 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
IsxA1A546 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
IsxA1A546 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.49□□□□□ -0.09
IsxA1A546 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.49□□□□□ -0.09
IsxA1A546 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
IsxA1A546 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
IsxA1A546 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.49□□□□□ -0.09
IsxA1A546 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
IsxA1A546 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
IsxA1A546 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
IsxA1A546 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IsxA1A546 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IsxA1A546 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.49□□□□□ -0.09
IsxA1A546 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IsxA1A546 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IsxA1A546 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
IsxA1A546 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IsxA1A546 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IsxA1A546 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IsxA1A546 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
IsxA1A546 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IsxA1A546 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
IsxA1A546 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.48□□□□□ -0.09
IsxA1A546 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
IsxA1A546 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
IsxA1A546 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.48□□□□□ -0.09
IsxA1A546 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
IsxA1A546 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IsxA1A546 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
IsxA1A546 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms