Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 GUSBP12-201ENST00000513727 720 ntBASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 KRT18P41-201ENST00000518924 1277 ntBASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TBC1D3EA0A087X179 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 AC012615.1-201ENST00000565797 1299 ntBASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 AC111152.3-201ENST00000569699 673 ntBASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 AC124864.1-201ENST00000623408 392 ntBASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.35■□□□□ 0.53
TBC1D3EA0A087X179 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 RN7SL510P-201ENST00000581311 263 ntBASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TBC1D3EA0A087X179 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TBC1D3EA0A087X179 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TBC1D3EA0A087X179 AC099343.3-201ENST00000605834 2503 ntBASIC18.33■□□□□ 0.53
TBC1D3EA0A087X179 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.33■□□□□ 0.53
TBC1D3EA0A087X179 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.33■□□□□ 0.53
TBC1D3EA0A087X179 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TBC1D3EA0A087X179 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TBC1D3EA0A087X179 AL353692.3-201ENST00000407031 1396 ntBASIC18.33■□□□□ 0.53
TBC1D3EA0A087X179 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TBC1D3EA0A087X179 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.33■□□□□ 0.53
TBC1D3EA0A087X179 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TBC1D3EA0A087X179 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.33■□□□□ 0.52
TBC1D3EA0A087X179 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TBC1D3EA0A087X179 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.33■□□□□ 0.52
TBC1D3EA0A087X179 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.33■□□□□ 0.52
TBC1D3EA0A087X179 AL845331.1-201ENST00000424978 1190 ntBASIC18.33■□□□□ 0.52
TBC1D3EA0A087X179 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.33■□□□□ 0.52
TBC1D3EA0A087X179 AC104819.1-201ENST00000504587 486 ntBASIC18.33■□□□□ 0.52
TBC1D3EA0A087X179 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.33■□□□□ 0.52
TBC1D3EA0A087X179 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.33■□□□□ 0.52
TBC1D3EA0A087X179 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TBC1D3EA0A087X179 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms