Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK3Q9H422 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK3Q9H422 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK3Q9H422 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK3Q9H422 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK3Q9H422 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK3Q9H422 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK3Q9H422 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HIPK3Q9H422 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.15■□□□□ 0.82
HIPK3Q9H422 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK3Q9H422 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.15■□□□□ 0.82
HIPK3Q9H422 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.15■□□□□ 0.82
HIPK3Q9H422 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
HIPK3Q9H422 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.15■□□□□ 0.82
HIPK3Q9H422 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HIPK3Q9H422 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK3Q9H422 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK3Q9H422 FP475955.4-201ENST00000623131 1990 ntBASIC20.15■□□□□ 0.82
HIPK3Q9H422 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK3Q9H422 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.15■□□□□ 0.82
HIPK3Q9H422 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.15■□□□□ 0.82
HIPK3Q9H422 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK3Q9H422 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HIPK3Q9H422 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK3Q9H422 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.15■□□□□ 0.82
HIPK3Q9H422 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK3Q9H422 AL157384.1-201ENST00000445995 2473 ntBASIC20.14■□□□□ 0.82
HIPK3Q9H422 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIPK3Q9H422 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIPK3Q9H422 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HIPK3Q9H422 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HIPK3Q9H422 RCN1P2-201ENST00000398357 915 ntBASIC20.14■□□□□ 0.81
HIPK3Q9H422 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.14■□□□□ 0.81
HIPK3Q9H422 SCARNA2-201ENST00000458748 420 ntBASIC20.14■□□□□ 0.81
HIPK3Q9H422 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
HIPK3Q9H422 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.14■□□□□ 0.81
HIPK3Q9H422 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.14■□□□□ 0.81
HIPK3Q9H422 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.14■□□□□ 0.81
HIPK3Q9H422 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HIPK3Q9H422 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.14■□□□□ 0.81
HIPK3Q9H422 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HIPK3Q9H422 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HIPK3Q9H422 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.14■□□□□ 0.81
HIPK3Q9H422 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK3Q9H422 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.13■□□□□ 0.81
HIPK3Q9H422 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.13■□□□□ 0.81
HIPK3Q9H422 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK3Q9H422 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK3Q9H422 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK3Q9H422 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.13■□□□□ 0.81
HIPK3Q9H422 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK3Q9H422 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK3Q9H422 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK3Q9H422 FGFR3P6-201ENST00000457012 610 ntBASIC20.13■□□□□ 0.81
HIPK3Q9H422 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.13■□□□□ 0.81
HIPK3Q9H422 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK3Q9H422 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
HIPK3Q9H422 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK3Q9H422 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.13■□□□□ 0.81
HIPK3Q9H422 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK3Q9H422 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK3Q9H422 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.13■□□□□ 0.81
HIPK3Q9H422 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.13■□□□□ 0.81
HIPK3Q9H422 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 AL357033.4-201ENST00000617703 1807 ntBASIC20.12■□□□□ 0.81
HIPK3Q9H422 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 RBM17P3-201ENST00000417687 1192 ntBASIC20.12■□□□□ 0.81
HIPK3Q9H422 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 MTDHP3-201ENST00000594186 672 ntBASIC20.12■□□□□ 0.81
HIPK3Q9H422 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HIPK3Q9H422 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK3Q9H422 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms