Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.63□□□□□ -0.39
Sft2d2Q8VD57 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d2Q8VD57 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d2Q8VD57 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d2Q8VD57 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d2Q8VD57 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d2Q8VD57 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d2Q8VD57 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d2Q8VD57 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d2Q8VD57 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Gm7638-201ENSMUST00000121348 967 ntBASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d2Q8VD57 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sft2d2Q8VD57 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Gm13186-201ENSMUST00000118031 316 ntBASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sft2d2Q8VD57 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms