Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RB1P06400 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RB1P06400 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RB1P06400 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RB1P06400 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.5■□□□□ 0.71
RB1P06400 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RB1P06400 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.5■□□□□ 0.71
RB1P06400 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RB1P06400 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RB1P06400 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RB1P06400 AC005104.2-201ENST00000427818 678 ntBASIC19.5■□□□□ 0.71
RB1P06400 HNRNPDP1-201ENST00000439535 754 ntBASIC19.5■□□□□ 0.71
RB1P06400 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.5■□□□□ 0.71
RB1P06400 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.5■□□□□ 0.71
RB1P06400 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.5■□□□□ 0.71
RB1P06400 AC145285.3-201ENST00000564603 959 ntBASIC19.5■□□□□ 0.71
RB1P06400 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RB1P06400 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RB1P06400 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RB1P06400 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RB1P06400 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.5■□□□□ 0.71
RB1P06400 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.5■□□□□ 0.71
RB1P06400 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.5■□□□□ 0.71
RB1P06400 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RB1P06400 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.49■□□□□ 0.71
RB1P06400 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RB1P06400 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RB1P06400 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RB1P06400 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RB1P06400 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.49■□□□□ 0.71
RB1P06400 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.49■□□□□ 0.71
RB1P06400 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.49■□□□□ 0.71
RB1P06400 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.49■□□□□ 0.71
RB1P06400 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 AC005336.2-201ENST00000593183 939 ntBASIC19.49■□□□□ 0.71
RB1P06400 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.49■□□□□ 0.71
RB1P06400 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RB1P06400 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.49■□□□□ 0.71
RB1P06400 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.49■□□□□ 0.71
RB1P06400 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.49■□□□□ 0.71
RB1P06400 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RB1P06400 AC141586.3-201ENST00000562166 1838 ntBASIC19.48■□□□□ 0.71
RB1P06400 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RB1P06400 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RB1P06400 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RB1P06400 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.48■□□□□ 0.71
RB1P06400 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
RB1P06400 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 AC068472.1-201ENST00000474589 881 ntBASIC19.48■□□□□ 0.71
RB1P06400 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.48■□□□□ 0.71
RB1P06400 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.48■□□□□ 0.71
RB1P06400 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.48■□□□□ 0.71
RB1P06400 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.48■□□□□ 0.71
RB1P06400 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.48■□□□□ 0.71
RB1P06400 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RB1P06400 HEIH-201ENST00000623091 1652 ntBASIC19.48■□□□□ 0.71
RB1P06400 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.48■□□□□ 0.71
RB1P06400 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
RB1P06400 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RB1P06400 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RB1P06400 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
RB1P06400 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.47■□□□□ 0.71
RB1P06400 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.47■□□□□ 0.71
RB1P06400 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 MIR149-201ENST00000384879 89 ntBASIC19.47■□□□□ 0.71
RB1P06400 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.47■□□□□ 0.71
RB1P06400 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms