Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Gm44863-201ENSMUST00000207613 1422 ntBASIC19.98■□□□□ 0.79
Rtn4Q99P72 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.98■□□□□ 0.79
Rtn4Q99P72 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.97■□□□□ 0.79
Rtn4Q99P72 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Gm13333-201ENSMUST00000119424 781 ntBASIC19.97■□□□□ 0.79
Rtn4Q99P72 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.97■□□□□ 0.79
Rtn4Q99P72 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Rtn4Q99P72 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4Q99P72 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.96■□□□□ 0.79
Rtn4Q99P72 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Gm42941-201ENSMUST00000200347 1321 ntBASIC19.96■□□□□ 0.79
Rtn4Q99P72 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4Q99P72 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
Rtn4Q99P72 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.95■□□□□ 0.78
Rtn4Q99P72 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.95■□□□□ 0.78
Rtn4Q99P72 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Gm15173-201ENSMUST00000122049 433 ntBASIC19.95■□□□□ 0.78
Rtn4Q99P72 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.95■□□□□ 0.78
Rtn4Q99P72 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4Q99P72 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.94■□□□□ 0.78
Rtn4Q99P72 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4Q99P72 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms