Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc5Q91XW9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc5Q91XW9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgc5Q91XW9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgc5Q91XW9 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.77■□□□□ 0.43
Pcdhgc5Q91XW9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.77■□□□□ 0.43
Pcdhgc5Q91XW9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgc5Q91XW9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgc5Q91XW9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
Pcdhgc5Q91XW9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhgc5Q91XW9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Gm25406-201ENSMUST00000157599 105 ntBASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc5Q91XW9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Gm9172-201ENSMUST00000212092 954 ntBASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Chchd1-203ENSMUST00000224633 557 ntBASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms