Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ACTN4O43707 AC036111.1-201ENST00000533973 1582 ntBASIC20.78■□□□□ 0.92
ACTN4O43707 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACTN4O43707 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACTN4O43707 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.78■□□□□ 0.92
ACTN4O43707 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.78■□□□□ 0.92
ACTN4O43707 MIR3180-5-201ENST00000583743 153 ntBASIC20.78■□□□□ 0.92
ACTN4O43707 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.78■□□□□ 0.92
ACTN4O43707 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.78■□□□□ 0.92
ACTN4O43707 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACTN4O43707 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ACTN4O43707 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ACTN4O43707 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACTN4O43707 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ACTN4O43707 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
ACTN4O43707 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACTN4O43707 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.77■□□□□ 0.92
ACTN4O43707 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.77■□□□□ 0.92
ACTN4O43707 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.77■□□□□ 0.92
ACTN4O43707 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.77■□□□□ 0.92
ACTN4O43707 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACTN4O43707 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.77■□□□□ 0.92
ACTN4O43707 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACTN4O43707 LETM1P2-201ENST00000597330 2178 ntBASIC20.77■□□□□ 0.92
ACTN4O43707 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ACTN4O43707 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACTN4O43707 AC008764.6-201ENST00000595909 2069 ntBASIC20.77■□□□□ 0.92
ACTN4O43707 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACTN4O43707 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ACTN4O43707 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ACTN4O43707 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.77■□□□□ 0.91
ACTN4O43707 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.77■□□□□ 0.91
ACTN4O43707 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACTN4O43707 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACTN4O43707 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ACTN4O43707 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACTN4O43707 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.76■□□□□ 0.91
ACTN4O43707 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ACTN4O43707 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ACTN4O43707 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ACTN4O43707 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACTN4O43707 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ACTN4O43707 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACTN4O43707 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.76■□□□□ 0.91
ACTN4O43707 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.76■□□□□ 0.91
ACTN4O43707 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.76■□□□□ 0.91
ACTN4O43707 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.76■□□□□ 0.91
ACTN4O43707 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.76■□□□□ 0.91
ACTN4O43707 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.76■□□□□ 0.91
ACTN4O43707 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.76■□□□□ 0.91
ACTN4O43707 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACTN4O43707 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ACTN4O43707 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
ACTN4O43707 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACTN4O43707 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ACTN4O43707 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.76■□□□□ 0.91
ACTN4O43707 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.75■□□□□ 0.91
ACTN4O43707 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.75■□□□□ 0.91
ACTN4O43707 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.75■□□□□ 0.91
ACTN4O43707 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ACTN4O43707 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.75■□□□□ 0.91
ACTN4O43707 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.75■□□□□ 0.91
ACTN4O43707 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.75■□□□□ 0.91
ACTN4O43707 AP003041.3-201ENST00000527151 707 ntBASIC20.75■□□□□ 0.91
ACTN4O43707 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.75■□□□□ 0.91
ACTN4O43707 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.75■□□□□ 0.91
ACTN4O43707 AP000525.1-201ENST00000608286 694 ntBASIC20.75■□□□□ 0.91
ACTN4O43707 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
ACTN4O43707 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 AC099343.3-201ENST00000605834 2503 ntBASIC20.75■□□□□ 0.91
ACTN4O43707 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 AC138932.1-201ENST00000534164 6830 ntBASIC20.75■□□□□ 0.91
ACTN4O43707 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACTN4O43707 AC067852.2-201ENST00000590513 2313 ntBASIC20.75■□□□□ 0.91
ACTN4O43707 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.74■□□□□ 0.91
ACTN4O43707 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTN4O43707 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.74■□□□□ 0.91
ACTN4O43707 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTN4O43707 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ACTN4O43707 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTN4O43707 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.74■□□□□ 0.91
ACTN4O43707 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTN4O43707 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACTN4O43707 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ACTN4O43707 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.74■□□□□ 0.91
ACTN4O43707 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.74■□□□□ 0.91
ACTN4O43707 AL390955.1-201ENST00000428694 934 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms