Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL20A1Q9P218 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
COL20A1Q9P218 SDHAP2-201ENST00000455183 2001 ntBASIC20.94■□□□□ 0.94
COL20A1Q9P218 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 MYLKP1-201ENST00000509077 1580 ntBASIC20.93■□□□□ 0.94
COL20A1Q9P218 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 MIR149-201ENST00000384879 89 ntBASIC20.93■□□□□ 0.94
COL20A1Q9P218 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.93■□□□□ 0.94
COL20A1Q9P218 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.93■□□□□ 0.94
COL20A1Q9P218 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.93■□□□□ 0.94
COL20A1Q9P218 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.93■□□□□ 0.94
COL20A1Q9P218 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.93■□□□□ 0.94
COL20A1Q9P218 AC009065.1-201ENST00000564055 1225 ntBASIC20.93■□□□□ 0.94
COL20A1Q9P218 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.93■□□□□ 0.94
COL20A1Q9P218 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COL20A1Q9P218 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 AC005082.1-201ENST00000413042 2259 ntBASIC20.93■□□□□ 0.94
COL20A1Q9P218 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.93■□□□□ 0.94
COL20A1Q9P218 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL20A1Q9P218 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL20A1Q9P218 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.92■□□□□ 0.94
COL20A1Q9P218 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL20A1Q9P218 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL20A1Q9P218 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL20A1Q9P218 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL20A1Q9P218 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL20A1Q9P218 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL20A1Q9P218 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 LINC00265-3P-201ENST00000447588 903 ntBASIC20.91■□□□□ 0.94
COL20A1Q9P218 TOB2P1-201ENST00000469761 992 ntBASIC20.91■□□□□ 0.94
COL20A1Q9P218 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL20A1Q9P218 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL20A1Q9P218 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL20A1Q9P218 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
COL20A1Q9P218 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL20A1Q9P218 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.9■□□□□ 0.94
COL20A1Q9P218 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL20A1Q9P218 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL20A1Q9P218 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL20A1Q9P218 KRT89P-201ENST00000620027 1478 ntBASIC20.9■□□□□ 0.94
COL20A1Q9P218 AC009102.3-201ENST00000623118 1491 ntBASIC20.9■□□□□ 0.94
COL20A1Q9P218 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL20A1Q9P218 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL20A1Q9P218 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL20A1Q9P218 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL20A1Q9P218 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.9■□□□□ 0.94
COL20A1Q9P218 RN7SL606P-201ENST00000472779 293 ntBASIC20.9■□□□□ 0.94
COL20A1Q9P218 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.9■□□□□ 0.94
COL20A1Q9P218 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.9■□□□□ 0.94
COL20A1Q9P218 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms