Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Zkscan3-208ENSMUST00000224820 5398 ntBASIC20.02■□□□□ 0.8
Rtn4Q99P72 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Gm18206-201ENSMUST00000207027 926 ntBASIC20.02■□□□□ 0.8
Rtn4Q99P72 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rtn4Q99P72 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4Q99P72 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rtn4Q99P72 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rtn4Q99P72 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Rtn4Q99P72 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Gm7862-201ENSMUST00000121461 292 ntBASIC20.01■□□□□ 0.79
Rtn4Q99P72 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4Q99P72 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4Q99P72 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rtn4Q99P72 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20■□□□□ 0.79
Rtn4Q99P72 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20■□□□□ 0.79
Rtn4Q99P72 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20■□□□□ 0.79
Rtn4Q99P72 AC127349.1-201ENSMUST00000224590 266 ntBASIC20■□□□□ 0.79
Rtn4Q99P72 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20■□□□□ 0.79
Rtn4Q99P72 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4Q99P72 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rtn4Q99P72 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.99■□□□□ 0.79
Rtn4Q99P72 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.99■□□□□ 0.79
Rtn4Q99P72 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.99■□□□□ 0.79
Rtn4Q99P72 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.99■□□□□ 0.79
Rtn4Q99P72 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4Q99P72 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4Q99P72 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms