Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf4Q8K4J2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf4Q8K4J2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf4Q8K4J2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf4Q8K4J2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf4Q8K4J2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf4Q8K4J2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Gm27011-201ENSMUST00000182352 972 ntBASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf4Q8K4J2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ebf4Q8K4J2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf4Q8K4J2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms