Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 C1QL1P1-201ENST00000568105 661 ntBASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 AC090164.3-201ENST00000610780 2143 ntBASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM53Q6P2H8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM53Q6P2H8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 AC092850.2-201ENST00000623821 2697 ntBASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 AL353807.1-201ENST00000427475 662 ntBASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 GCSHP5-201ENST00000443090 522 ntBASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 UBE2SP1-201ENST00000450587 669 ntBASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 AP002982.1-201ENST00000492365 877 ntBASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms