Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Xcl1P47993 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.23□□□□□ -0.77
Xcl1P47993 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Xcl1P47993 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.23□□□□□ -0.77
Xcl1P47993 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Xcl1P47993 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Xcl1P47993 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Xcl1P47993 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Xcl1P47993 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC10.23□□□□□ -0.77
Xcl1P47993 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC10.23□□□□□ -0.77
Xcl1P47993 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC10.23□□□□□ -0.77
Xcl1P47993 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Xcl1P47993 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC10.23□□□□□ -0.77
Xcl1P47993 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC10.23□□□□□ -0.77
Xcl1P47993 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.23□□□□□ -0.77
Xcl1P47993 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.23□□□□□ -0.77
Xcl1P47993 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 CT010444.2-201ENSMUST00000217877 1629 ntBASIC10.22□□□□□ -0.77
Xcl1P47993 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Xcl1P47993 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.22□□□□□ -0.77
Xcl1P47993 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC10.22□□□□□ -0.77
Xcl1P47993 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Xcl1P47993 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Xcl1P47993 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC10.21□□□□□ -0.77
Xcl1P47993 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Gm12251-201ENSMUST00000117893 792 ntBASIC10.21□□□□□ -0.77
Xcl1P47993 Gm38285-201ENSMUST00000192928 922 ntBASIC10.21□□□□□ -0.77
Xcl1P47993 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Xcl1P47993 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Xcl1P47993 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Xcl1P47993 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.21□□□□□ -0.78
Xcl1P47993 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms