Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Gm13234-201ENSMUST00000120010 747 ntBASIC11.09□□□□□ -0.63
Hbb-b1P02088 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Hbb-b1P02088 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hbb-b1P02088 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.08□□□□□ -0.63
Hbb-b1P02088 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Gm17661-201ENSMUST00000170317 270 ntBASIC11.08□□□□□ -0.64
Hbb-b1P02088 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Gm5408-201ENSMUST00000197998 747 ntBASIC11.08□□□□□ -0.64
Hbb-b1P02088 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hbb-b1P02088 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.07□□□□□ -0.64
Hbb-b1P02088 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.07□□□□□ -0.64
Hbb-b1P02088 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.07□□□□□ -0.64
Hbb-b1P02088 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hbb-b1P02088 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hbb-b1P02088 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms